Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0266700-00 | Rice | cytosol | 11.13 | 53.51 |
| Os08t0126100-00 | Rice | nucleus | 47.45 | 36.93 |
| Os08t0126000-00 | Rice | plastid | 43.98 | 31.84 |
| Os02t0619600-01 | Rice | mitochondrion | 36.31 | 28.07 |
| Os10t0464800-00 | Rice | nucleus | 47.99 | 27.71 |
| Os03t0142500-01 | Rice | plasma membrane | 34.49 | 27.23 |
| Os04t0508800-01 | Rice | plasma membrane | 34.67 | 26.84 |
| Os02t0806700-01 | Rice | nucleus | 34.31 | 26.0 |
| Os12t0431700-00 | Rice | cytosol | 8.94 | 23.67 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 25.55 | 20.32 |
| Os11t0650600-00 | Rice | cytosol | 18.98 | 18.28 |
| Os11t0687100-01 | Rice | nucleus | 20.99 | 18.17 |
| Os11t0650500-00 | Rice | cytosol | 18.98 | 17.6 |
| Os03t0403600-01 | Rice | cytosol, extracellular | 13.32 | 17.55 |
| Os11t0679000-00 | Rice | cytosol | 17.88 | 16.9 |
| Os11t0687200-02 | Rice | golgi | 18.43 | 16.89 |
| Os06t0578700-01 | Rice | golgi | 17.88 | 16.84 |
| Os06t0578100-00 | Rice | nucleus | 20.44 | 16.82 |
| Os01t0640200-00 | Rice | cytosol | 18.98 | 16.61 |
| Os09t0298500-01 | Rice | nucleus | 15.33 | 15.79 |
| Os10t0464500-00 | Rice | extracellular, plasma membrane | 12.04 | 13.58 |
Protein Annotations
| Gene3D:3.30.40.10 | Gene3D:3.40.50.410 | MapMan:35.2 | UniProt:A0A0P0Y7Y6 | ProteinID:BAT16276.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:IPR001841 |
| InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 | EnsemblPlantsGene:Os12g0203500 | EnsemblPlants:Os12t0203500-00 | PFAM:PF00092 |
| PFAM:PF14624 | PFAM:PF17123 | PFscan:PS50089 | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF94 | SMART:SM00184 |
| SUPFAM:SSF53300 | SUPFAM:SSF57850 | SignalP:SignalP-noTM | UniParc:UPI000393B0EA | InterPro:VWF_A | InterPro:Vwaint_dom |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : |
Description
Zinc finger, RING-type domain containing protein. (Os12t0203500-00)
Coordinates
chr12:+:5415946..5417674
Molecular Weight (calculated)
58189.0 Da
IEP (calculated)
8.849
GRAVY (calculated)
-0.299
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGTMAMGG IRCPVCFAAM AAGQAIFTAE CSHTFHLRCV PGGAAACPVC ATPWRDAPSP LTTSSIPAAY DDDDPVEPVA TAARNSSGGG GGVLVLKTHC
101: EYPALSRGAA RDGFAVLVHA KAPAAAAEAA GRAPLDLVTV LDVSTSMTGD KLALVKRAMG FVIDSLGAAD RLSVVAFATP TRAGCSAAPP DAHVGGREGD
201: GQARGGRPRR EREHQHPRRP RRGRQGARRP PPHRRRRQRH PPLRRPRQPD HGLPWPLPHD GFQGSGDQLR RPRAAVFHAR RRRRAVRAGA RNLAVIQDTF
301: ARCIGGLLSV AAQNARISVE CLDPGVRVRA VKSGRYESRI DAEGRAATVD VGELYADEER RFLLLLDVPR ADGDAAVATR LASVRCTYRD TATEQSVDVA
401: GEEDAVVLRP AVATGVAPSM EVELERERVR LEAADDIALA RAAAERGAYG EAARILDARR EALSRSAPAA SGDAMCAALV AELRELSERV ADEREYAQTG
501: RACVLAGMSS HGQQRASSVQ LGELRVRVFV RVRDTGDAED GEALGDFA
101: EYPALSRGAA RDGFAVLVHA KAPAAAAEAA GRAPLDLVTV LDVSTSMTGD KLALVKRAMG FVIDSLGAAD RLSVVAFATP TRAGCSAAPP DAHVGGREGD
201: GQARGGRPRR EREHQHPRRP RRGRQGARRP PPHRRRRQRH PPLRRPRQPD HGLPWPLPHD GFQGSGDQLR RPRAAVFHAR RRRRAVRAGA RNLAVIQDTF
301: ARCIGGLLSV AAQNARISVE CLDPGVRVRA VKSGRYESRI DAEGRAATVD VGELYADEER RFLLLLDVPR ADGDAAVATR LASVRCTYRD TATEQSVDVA
401: GEEDAVVLRP AVATGVAPSM EVELERERVR LEAADDIALA RAAAERGAYG EAARILDARR EALSRSAPAA SGDAMCAALV AELRELSERV ADEREYAQTG
501: RACVLAGMSS HGQQRASSVQ LGELRVRVFV RVRDTGDAED GEALGDFA
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.