Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0650500-00 | Rice | cytosol | 42.88 | 41.29 |
| Os04t0266700-00 | Rice | cytosol | 6.5 | 32.46 |
| Os11t0679000-00 | Rice | cytosol | 27.42 | 26.9 |
| Os11t0687100-01 | Rice | nucleus | 29.17 | 26.22 |
| KXG25767 | Sorghum | mitochondrion | 20.74 | 25.21 |
| Os06t0578100-00 | Rice | nucleus | 28.47 | 24.32 |
| EES10354 | Sorghum | plastid | 20.21 | 24.16 |
| Os12t0431700-00 | Rice | cytosol | 8.26 | 22.71 |
| Os06t0578700-01 | Rice | golgi | 23.02 | 22.51 |
| Os11t0687200-02 | Rice | golgi | 23.55 | 22.41 |
| Os08t0126100-00 | Rice | nucleus | 25.31 | 20.45 |
| Os03t0142500-01 | Rice | plasma membrane | 23.55 | 19.31 |
| Os12t0203500-00 | Rice | vacuole | 18.28 | 18.98 |
| Os02t0619600-01 | Rice | mitochondrion | 23.2 | 18.62 |
| Os02t0806700-01 | Rice | nucleus | 23.02 | 18.12 |
| Os08t0126000-00 | Rice | plastid | 23.9 | 17.97 |
| Os04t0508800-01 | Rice | plasma membrane | 22.32 | 17.94 |
| Os03t0403600-01 | Rice | cytosol, extracellular | 12.13 | 16.59 |
| Os10t0464500-00 | Rice | extracellular, plasma membrane | 12.48 | 14.61 |
| Os10t0464800-00 | Rice | nucleus | 23.55 | 14.12 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 17.05 | 14.08 |
| Os01t0640200-00 | Rice | cytosol | 15.11 | 13.74 |
| Os09t0298500-01 | Rice | nucleus | 10.9 | 11.65 |
| GSMUA_Achr4P06340_001 | Banana | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os11t0650600-00 | EnsemblPlantsGene:Os11g0650600 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:vWFA_dom_sf | ncoils:Coil | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF57 | PFAM:PF13768 | PFscan:PS50234 |
| ProteinID:BAT15078.1 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | UniParc:UPI000393C0A6 | UniProt:A0A0P0Y4T9 |
| MapMan:35.2 | : | : | : | : | : |
Description
Similar to von Willebrand factor type A domain containing protein, expressed. (Os11t0650600-00)
Coordinates
chr11:+:25950530..25952239
Molecular Weight (calculated)
60967.9 Da
IEP (calculated)
7.034
GRAVY (calculated)
0.010
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: FKTYKFYLQA PVSALASDKV QLSTFPRVDA IPRRECHPRL PVLVRVAVPA TAARRAPVDL VTLLDISCGG GGGAPARRLD LLRKAMDLVI GNLGADDRLA
101: IVPFHSSVVD ATGLLEMSVE GRGVASRKVQ SLAVAGGTKL FPALNAAVEI LEARCWEAKR ERVGAVVLIS DGDDRTIFRE AINPRYPVHA FGFRGAHDAR
201: AVHHVADHTS GVYGVLDDEH DRVTDAFAAC VRRVTSVVAV DAQVDLTCGA YSRASLLAVE RSGDHRAHVD EDRRSGFIYA GALCAGDVKN FLVYVDVDRE
301: ADGGGVTELL TAHGTYMDAA RRKETTVHLD ERMAVVQRRD KVPDVSRDVA AELVRVDTVK MVAVVLDRFK DKGSAAAAME LREGWCRVKA SEDARAAGAA
401: SLAVLEREIE EMEASLVRCT GLSTMLSWLN RHKLQLHTAA AAAATARVSP APPSSSNVVA DAITAGEGHV KEVAGVAVVS GGTKRKCVEM DMIEERLAYW
501: SKVKHDLPLM FPDHAAAAAT AAAAAAAEGT ASTGDHVAAV FRDASLETIN RAMFHDVYLV RADSFRCPL
101: IVPFHSSVVD ATGLLEMSVE GRGVASRKVQ SLAVAGGTKL FPALNAAVEI LEARCWEAKR ERVGAVVLIS DGDDRTIFRE AINPRYPVHA FGFRGAHDAR
201: AVHHVADHTS GVYGVLDDEH DRVTDAFAAC VRRVTSVVAV DAQVDLTCGA YSRASLLAVE RSGDHRAHVD EDRRSGFIYA GALCAGDVKN FLVYVDVDRE
301: ADGGGVTELL TAHGTYMDAA RRKETTVHLD ERMAVVQRRD KVPDVSRDVA AELVRVDTVK MVAVVLDRFK DKGSAAAAME LREGWCRVKA SEDARAAGAA
401: SLAVLEREIE EMEASLVRCT GLSTMLSWLN RHKLQLHTAA AAAATARVSP APPSSSNVVA DAITAGEGHV KEVAGVAVVS GGTKRKCVEM DMIEERLAYW
501: SKVKHDLPLM FPDHAAAAAT AAAAAAAEGT ASTGDHVAAV FRDASLETIN RAMFHDVYLV RADSFRCPL
001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
Arabidopsis Description
Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.