Factsheet for Os02t0806700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051977_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	90.32	89.33
OQU85917	Sorghum	nucleus	91.01	89.28
Zm00001d018428_P001	Maize	mitochondrion	87.83	85.93
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	87.55	85.77
TraesCS6B01G413100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	87.55	85.66
TraesCS6A01G375500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	87.0	85.58
HORVU6Hr1G088580.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	87.0	84.77
GSMUA_Achr6P36520_001	Banana	plastid	53.53	55.36
Os02t0619600-01	Rice	mitochondrion	52.28	53.31
Os04t0508800-01	Rice	plasma membrane	50.76	51.84
Os03t0142500-01	Rice	plasma membrane	46.2	48.13
Os04t0266700-00	Rice	cytosol	7.47	47.37
Os12t0203500-00	Rice	vacuole	26.0	34.31
Os12t0431700-00	Rice	cytosol	9.82	34.3
Os08t0126100-00	Rice	nucleus	33.33	34.23
Os08t0126000-00	Rice	plastid	31.12	29.72
Os10t0464500-00	Rice	extracellular, plasma membrane	19.23	28.6
Os10t0464800-00	Rice	nucleus	34.58	26.34
Os04t0101800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	24.48	25.69
Os09t0298500-01	Rice	nucleus	17.29	23.5
Os11t0650600-00	Rice	cytosol	18.12	23.02
Os11t0687100-01	Rice	nucleus	19.78	22.59
Os03t0403600-01	Rice	cytosol, extracellular	12.86	22.36
Os11t0650500-00	Rice	cytosol	17.84	21.83
Os06t0578100-00	Rice	nucleus	19.09	20.72
Os01t0640200-00	Rice	cytosol	17.7	20.45
Os06t0578700-01	Rice	golgi	16.46	20.45
Os11t0687200-02	Rice	golgi	16.74	20.23
Os11t0679000-00	Rice	cytosol	15.77	19.66

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	EntrezGene:4331074	EMBL:AK072167	ProteinID:BAD19389.1
ProteinID:BAF10364.1	ProteinID:BAS81477.1	ncoils:Coil	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	EnsemblPlantsGene:Os02g0806700	EnsemblPlants:Os02t0806700-01	PFAM:PF00092	PFAM:PF14624	PFAM:PF17123
PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF97	UniProt:Q6K8E9	SMART:SM00184
SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI0000375850	InterPro:VWF_A	InterPro:Vwaint_dom
RefSeq:XP_015625171.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:

Description

Similar to Retroelement pol polyprotein-like. (Os02t0806700-01)

Coordinates

chr2:-:34439819..34444555

Molecular Weight (calculated)

78183.8 Da

IEP (calculated)

8.288

GRAVY (calculated)

-0.344

Length

723 amino acids

Sequence
(BLAST)

001: MESRWRKAKM SLGLNLCVYV PRTLDDGDSP STGSSTAALV SPVASSSSAA TSANTTPTAE QRVKGAGALM PTTPTPTSAG LRLSKSGSKS FKKTCAICLT
101: TMKPGQGHAL FTAECSHTFH FHCIAANVKH GSNNCPVCRT KWKELPFRGP LPGEFPQGSA RINPVNGHQN GGQMTILRPL PRARSSGRLH HMTSLLPDTD
201: RSIFNDDEPL DSLSEANEGS QQGCLRTVEI KTYPEFTEVP ESTSERNFTV LVHLKAPLAQ TLQTSSKLED GNSLGTTRAP VDLITVLDVS GSMAGTKLAL
301: LKRAMGFVIQ NLGSSDRLSV IAFSSSARRL FPLRRMTETG RQQSLQAVYS LTSNGGTNIA EGLRKGSKVI EDRQAKNPVC SIILLSDGQD TYTVSPTAGV
401: HKAAPEYCSL LPYTSNGCQQ VPVHVFGFGA DHDSVSLHSI SQTSGGTFSF IETEAAIQDA FAQCIGGLLS VVAQDLHVKV ESLHPDVHFG SIRSGSYSSR
501: LADDKRNGSI DVGDMYAEEE RDFLMSVNVP PGYGETALLK VGCVYKDPLM KETINMADVQ VKISRPAFVS VQSVSIEVDR QKNRLHAAEV MAEARLSAER
601: GDLTHAVSLL EDCRRMIMGS TSGQSGDRLC QALDAELKEM QERMANRQRY EASGRAYVLS GLSSHSWQRA TARGDSTDSE SLIQAYQTSS MVDMLLRSQT
701: MSRSSTPPQM RHVKSFPARP QPR

Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)

001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR

Arabidopsis Description

Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.