Factsheet for Os10t0464800-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0266700-00	Rice	cytosol	8.01	66.67
TraesCS5A01G284900.1	Wheat	cytosol, mitochondrion, plastid	17.91	59.03
TraesCS5B01G284200.1	Wheat	cytosol	30.24	57.29
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	31.3	57.23
TraesCS7A01G423300.1	Wheat	cytosol	35.41	56.76
EER91509	Sorghum	nucleus	34.77	56.51
TraesCS5A01G359200.1	Wheat	cytosol, peroxisome, plastid	30.77	55.73
TraesCS1D01G433500.1	Wheat	cytosol	34.04	54.84
Zm00001d008553_P001	Maize	cytosol	28.56	54.31
OQU91675	Sorghum	cytosol	35.51	54.18
TraesCS1B01G456800.1	Wheat	cytosol	34.35	54.06
HORVU1Hr1G092690.1	Barley	cytosol	31.82	54.02
Zm00001d007190_P001	Maize	cytosol	28.13	53.29
TraesCS2B01G515000.1	Wheat	cytosol	28.13	50.57
TraesCS2D01G459400.1	Wheat	mitochondrion	27.71	50.19
Os08t0126100-00	Rice	nucleus	36.14	48.72
Os12t0203500-00	Rice	vacuole	27.71	47.99
Os08t0126000-00	Rice	plastid	31.19	39.1
Os02t0619600-01	Rice	mitochondrion	27.71	37.09
Os03t0142500-01	Rice	plasma membrane	26.87	36.74
Os04t0508800-01	Rice	plasma membrane	26.66	35.73
Os02t0806700-01	Rice	nucleus	26.34	34.58
Os12t0431700-00	Rice	cytosol	6.85	31.4
Os10t0464500-00	Rice	extracellular, plasma membrane	12.96	25.31
Os04t0101800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	17.28	23.8
Os03t0403600-01	Rice	cytosol, extracellular	10.43	23.8
Os11t0650600-00	Rice	cytosol	14.12	23.55
Os09t0298500-01	Rice	nucleus	13.17	23.5
Os11t0687100-01	Rice	nucleus	14.96	22.43
Os11t0650500-00	Rice	cytosol	13.59	21.83
Os06t0578700-01	Rice	golgi	12.64	20.62
Os11t0687200-02	Rice	golgi	12.86	20.4
Os06t0578100-00	Rice	nucleus	14.12	20.12
Os01t0640200-00	Rice	cytosol	13.07	19.81
Os11t0679000-00	Rice	cytosol	11.59	18.97

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	UniProt:A0A0P0XVD7	ProteinID:BAT11200.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465
EnsemblPlantsGene:Os10g0464800	EnsemblPlants:Os10t0464800-00	PFAM:PF00092	PFAM:PF00097	PFAM:PF14624	PFAM:PF17123
PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	SMART:SM00184	SMART:SM00327
SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI000393A72F	InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_C3HC4_RING-type
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

Zinc finger, RING-type domain containing protein. (Os10t0464800-00)

Coordinates

chr10:-:17152945..17157443

Molecular Weight (calculated)

99596.3 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.259

Length

949 amino acids

Sequence
(BLAST)

001: MDSAPCGICH GDMRRGGRGG GDAVFTAECS HQFHFHCISG TVARGRIACP LCHARWRELP SFRRGNDAAP PGASASASAS AAQPFFRPVE PRVFDDDEPL
101: VRAPRRLGER RHGGGAASVA SDGGGGSAVA LATHCENSAV ARDACREDFA VLVHARAPTG GGGGAAAEAQ RAPLDLVTVL DVSGSMVGNK LALLKQAMGF
201: VIDNLGPGDR LCVISFSSGA SRLMRLSRMT DAGKAHAKRA VGSLSARGGT NIGAALRKAA KVLDDRLYRN AVESVILLSD GQDTYTVPPR GGYDRDANYD
301: ALVPPSLVRA DAGGGGGRAP PVHTFGFGKD HDAAAMHTIA EVTGGTETDP CAICLGEIAG GQAIFTAECS HTFHNRCIAR NVAHGRRVCP LCNARWSDVP
401: ALSSSSAAAV EPDDDDEPPL YADDDPVEPA GEQAAATDGD AAAGLVVKAH CEYPAVARGA SRDKFAVLVH AKAAGAAAAA ASRAPLDLVT VLDVSGSMAG
501: RKLALVKKAM GFVIDNLGPA DRLCVVSFST EASRRTRLLR MSEVGKATAK RAVESLVDDS ATNIGDGLRV AGRVLGDRRH KNAVSSVILL SDGKDSYVVP
601: RRGNGMSYMD LVPPSFASSG GRGQLAPIHT FGFGADHDAA AMNTIAESTG GTFSFVENEA AIQDSFAQCI GGLLSVAVQD ARIAVACSSP GVLVREIKSG
701: RYESRVDADG RAASVEVGEL YADEERRFLL FINVPIAEAT EDATQLIKLS CTYRDTVTGR TIDVAAGEDA VVRRPLEVSA ADQEVSMEVE RERVRVEATE
801: DIAIARAAAE RGDHAEAART LQLRREAVEA SAPGFAGDVM CDELADDLCE LEEEVEDAPR YERAGRARML AGMSSHGLQR ASGTTYNSSR RKQCARKERA
901: KERLYATPAM GMMVSKSRDE PPPAAQRQQK GPGRGGDEQS EKKKKKSGD

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.