Factsheet for TraesCS7A01G423300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G433500.1	Wheat	cytosol	73.65	74.02
HORVU1Hr1G092690.1	Barley	cytosol	68.07	72.09
TraesCS1B01G456800.1	Wheat	cytosol	72.97	71.64
TraesCS5A01G284900.1	Wheat	cytosol, mitochondrion, plastid	28.04	57.64
TraesCS5A01G359200.1	Wheat	cytosol, peroxisome, plastid	50.68	57.25
TraesCS3A01G393700.1	Wheat	cytosol	49.16	55.22
TraesCS5A01G513100.1	Wheat	cytosol, plastid	40.2	48.18
TraesCS2A01G358400.2	Wheat	cytosol, nucleus, peroxisome	52.2	47.32
TraesCS1A01G421500.1	Wheat	plastid	47.97	45.15
TraesCS5A01G513000.1	Wheat	cytosol	53.72	42.97
Os10t0464800-00	Rice	nucleus	56.76	35.41
TraesCS5A01G512800.2	Wheat	mitochondrion	41.72	34.94
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	41.05	34.91
TraesCS6A01G227300.1	Wheat	mitochondrion	40.88	34.04
TraesCS6A01G375500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	39.53	31.84
TraesCS1A01G146700.1	Wheat	mitochondrion	32.43	29.58
TraesCS4A01G484700.1	Wheat	cytosol, unclear	23.99	27.1
TraesCS7A01G010300.1	Wheat	nucleus, unclear	23.99	27.1
TraesCS5A01G011500.1	Wheat	cytosol	22.64	26.8
TraesCS5A01G011700.1	Wheat	cytosol	22.8	25.67
TraesCS6A01G006500.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	23.14	19.38
TraesCS5A01G178300.1	Wheat	mitochondrion	17.23	19.35
TraesCS2A01G045100.1	Wheat	peroxisome	24.66	19.21
TraesCS7A01G426800.1	Wheat	cytosol, peroxisome, plasma membrane	22.64	18.48
TraesCS5A01G011800.1	Wheat	plastid	20.61	14.37

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	ncoils:Coil	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	PFAM:PF00092	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089
PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300
SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7A01G423300	EnsemblPlants:TraesCS7A01G423300.1	InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	TIGR:cd01466	TIGR:cd16448	SEG:seg	InterPro:vWFA_dom_sf	:

Description

No Description!

Coordinates

chr7A:-:615374562..615376407

Molecular Weight (calculated)

62443.6 Da

IEP (calculated)

6.046

GRAVY (calculated)

-0.216

Length

592 amino acids

Sequence
(BLAST)

001: MADTGDADVC AICLGGMVRG QASYTAECSH AFHLICISAS VAHGNHTCPL CKAPWTVLPA VNAPAQAAAP SSPSSSSQQV PRTYDDDEPT VGAQTAAATN
101: GGAVVLRTHC ECPAVARAAV RENFAVLVHA RAPSSAASEA ARAPLDLVTV LDVSGSMTGR KLALLKQAMG FVIDNLGSAD RLSVSFSNSA SRLIRLVRMS
201: DAGKAAAKRA VESLAANGGT NIGEGLRVAA QVFGDRQHMN AVASIMLLSD GQDTFTAPRR HRSGAAPNYI RGAGARPPAV HAFGFGTDHD AAAMHTIAEA
301: TGGTFSFIEN EAVVQDSFAQ CIGGLLTVTV QELRIAVTCL HPSVLVRAVK SGRYDNRVDA GGRSASVDVG ELYADEERRF LIFLDVPGAE DAVDVTGLVK
401: ASCTYRDAAT GQAATLAGDD AVVQRPIEAA DVRPSMEVER ERVRVEATED MAAAREAADR EQHAEGARIL RGRLEAVERS APGMAGDPMC KELEDELRVL
501: IAGVEDRREY ETTGRACFLS GMSSHGQQRA ATRQLQTASM PTAYVTPAME KMVKKSREQR QTGAAEPPPP PNRKRVKGQQ LDGESEERSE EA

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.