Factsheet for TraesCS7A01G426800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	95.31	94.92
TraesCS7B01G327100.1	Wheat	cytosol, peroxisome, plasma membrane	95.17	94.78
HORVU7Hr1G098290.1	Barley	cytosol, peroxisome, plasma membrane	82.34	82.92
TraesCS6A01G006500.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	55.31	56.72
HORVU0Hr1G022100.1	Barley	cytosol	52.41	52.85
Zm00001d024014_P001	Maize	cytosol	27.72	39.96
Zm00001d024886_P002	Maize	cytosol	28.41	39.92
TraesCS7A01G010300.1	Wheat	nucleus, unclear	26.76	37.02
TraesCS4A01G484700.1	Wheat	cytosol, unclear	26.62	36.83
TraesCS5A01G011500.1	Wheat	cytosol	22.62	32.8
TraesCS5A01G011700.1	Wheat	cytosol	23.59	32.51
TraesCS5A01G284900.1	Wheat	cytosol, mitochondrion, plastid	12.0	30.21
TraesCS5A01G359200.1	Wheat	cytosol, peroxisome, plastid	17.66	24.43
TraesCS5A01G513100.1	Wheat	cytosol, plastid	16.28	23.89
TraesCS3A01G393700.1	Wheat	cytosol	16.69	22.96
TraesCS7A01G423300.1	Wheat	cytosol	18.48	22.64
TraesCS1A01G421500.1	Wheat	plastid	17.24	19.87
TraesCS2A01G358400.2	Wheat	cytosol, nucleus, peroxisome	17.79	19.75
TraesCS5A01G512800.2	Wheat	mitochondrion	18.34	18.81
TraesCS5A01G513000.1	Wheat	cytosol	19.17	18.78
TraesCS6A01G227300.1	Wheat	mitochondrion	17.93	18.28
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	17.24	17.96
TraesCS6A01G375500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	17.38	17.14
TraesCS1A01G146700.1	Wheat	mitochondrion	13.79	15.41
TraesCS5A01G011800.1	Wheat	plastid	17.1	14.61
TraesCS5A01G178300.1	Wheat	mitochondrion	9.38	12.9
TraesCS2A01G045100.1	Wheat	peroxisome	12.83	12.24

Protein Annotations

EnsemblPlants:TraesCS7A01G426800.1	EnsemblPlantsGene:TraesCS7A01G426800	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	PFAM:PF00092	PFscan:PS50234	SEG:seg
SMART:SM00327	SUPFAM:SSF53300	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7A:+:619874235..619878339

Molecular Weight (calculated)

80695.5 Da

IEP (calculated)

9.840

GRAVY (calculated)

-0.359

Length

725 amino acids

Sequence
(BLAST)

001: MSSDFDEEDQ NVPYAHPPGP PLLDRADIVR LRWHASDRAP LHDNRQQVLL EVHDASAAAA GDRLGLDLVA VLDVSKSMRK KDRLGKMKTA MHFVINKLGP
101: KDRLSIVKFS EEAERLCSLL SVTPVNKPHL MNIVDSLQVI DPTNIRDGLE TALGVLARRR ITGGRVASIF LLSDGDENIG HATNVDVSDV PVYTFGFGTD
201: FDPKVLDEIA RRSKGGTFNF VDDGENMTEP FSQILGGLLS IVVQDLKLIV SPQPGDSILE DVDSRLYQQT RDDNSGAVIV HFGDLFAGEI RRVIAHIRLP
301: AVGQKKNATA IVAQCSYSVR GQPFYSRRLP VPMRRTPTGS ADPSRTMPGG LRTERARRQH VTFLDEVRTM ADGGDLHGAQ GKLVEARNDI AHEQSNPMID
401: FLRATLDKLM ALITSPDQHA GFRAYLRSLR TSHDRERVAA TGDVKGVRLF ETRHTSAFRG QAKRFEKQAT MGQRPPAHHG SNFNEEDDTN RLRQREEGRT
501: RMERPVAVEA RNNRPWKTWW GDDDKRHRSS ARSTSACAWV LCILCVLLVI GAIVLGVLLF AVYNHKMPYL AVADAQLGAL QYAGQDGTVQ NLQLSIAFLA
601: INKDSRADAS FSRVNLALKL QGVDMLLFRA PPFVVPPDSS MPLQYNDVVS TGRRLDKAGM RSMDKSLNAG VVPFDLHGKV RTRGNTGIFQ NTQFWTRFSC
701: RLRFFFPGNG TVLPADRRSC RSRWP

Best Arabidopsis Sequence Match ( AT3G54780.1 )
(BLAST)

001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.