Factsheet for TraesCS5A01G359200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	87.98	88.82
TraesCS5A01G284900.1	Wheat	cytosol, mitochondrion, plastid	42.56	77.43
Zm00001d008553_P001	Maize	cytosol	66.22	69.54
Zm00001d007190_P001	Maize	cytosol	66.22	69.26
TraesCS2D01G459400.1	Wheat	mitochondrion	68.51	68.51
OQU79988	Sorghum	cytosol	69.66	67.47
OQU90497	Sorghum	cytosol	66.03	67.18
TraesCS3A01G393700.1	Wheat	cytosol	51.91	51.61
TraesCS7A01G423300.1	Wheat	cytosol	57.25	50.68
TraesCS5A01G513100.1	Wheat	cytosol, plastid	42.37	44.94
TraesCS1A01G421500.1	Wheat	plastid	51.91	43.24
TraesCS2A01G358400.2	Wheat	cytosol, nucleus, peroxisome	51.15	41.04
TraesCS5A01G513000.1	Wheat	cytosol	51.34	36.35
TraesCS5A01G512800.2	Wheat	mitochondrion	42.37	31.4
TraesCS6A01G227300.1	Wheat	mitochondrion	42.18	31.08
Os10t0464800-00	Rice	nucleus	55.73	30.77
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	39.5	29.74
TraesCS6A01G375500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	40.08	28.57
TraesCS5A01G011500.1	Wheat	cytosol	25.38	26.6
TraesCS4A01G484700.1	Wheat	cytosol, unclear	25.57	25.57
TraesCS7A01G010300.1	Wheat	nucleus, unclear	25.19	25.19
TraesCS1A01G146700.1	Wheat	mitochondrion	30.92	24.96
TraesCS5A01G011700.1	Wheat	cytosol	24.24	24.14
TraesCS2A01G045100.1	Wheat	peroxisome	25.95	17.89
TraesCS6A01G006500.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	24.05	17.82
TraesCS7A01G426800.1	Wheat	cytosol, peroxisome, plasma membrane	24.43	17.66
TraesCS5A01G178300.1	Wheat	mitochondrion	16.03	15.94
TraesCS5A01G011800.1	Wheat	plastid	23.09	14.25

Protein Annotations

EnsemblPlants:TraesCS5A01G359200.1	EnsemblPlantsGene:TraesCS5A01G359200	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF51	PFAM:PF00092	PFAM:PF14624
PFscan:PS50234	SEG:seg	SMART:SM00327	SUPFAM:SSF53300	MapMan:35.1	:

Description

No Description!

Coordinates

chr5A:-:561176508..561180095

Molecular Weight (calculated)

55602.3 Da

IEP (calculated)

8.162

GRAVY (calculated)

-0.185

Length

524 amino acids

Sequence
(BLAST)

001: MSHTKVPYLA VPPPPAAAAP AAAYYQDDEP VEEKKPLANN GRGLVLKTHC EFPAIGRGAF RDKFAVLVHA RAPADVARAP LDLVTVLDVS GSMKGQKLAL
101: LKQAMAFVVD QLGPADRLSV VSFSGRAARL TCLARMSDAG KASAELAVDS LVVGSGTNIG EGLRVGAQVL VGRRLKNSVA SMILLSDGQD SRLRANKRYM
201: DLVPPLFVLA GSRPGPIHTF GFGANHDAAA LHTIAQATGG TFSFVGNQAA IQDSFAQCIG GLLSVAVQEA RIAVTCLHRG VHVQEVKSGC YGNHVDADGR
301: AASIDVGELY DGEERRFLVL VYVPRARPAE SVTRLIKVTC GYNDAATGQA ANAAAPAAVI QRPLELTDLP HPCMEVERER VRLATTQDIA AAREAAEGGQ
401: HASAARILDS RLKAVERSAP GTAGDDPTCE AIKEELRDLS ARVGDRREYQ QTGRACLLAG MSSHAQQRAS AVELQSASKA RAYLTPKMEE MVETSREQSR
501: KRGSSSDAGS SQLNKQIKQD LTED

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.