Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G284900.1 | Wheat | cytosol, mitochondrion, plastid | 29.96 | 51.39 |
| TraesCS2A01G358400.2 | Wheat | cytosol, nucleus, peroxisome | 65.18 | 49.31 |
| TraesCS5A01G513000.1 | Wheat | cytosol | 73.48 | 49.05 |
| EER95529 | Sorghum | nucleus | 60.93 | 46.31 |
| TraesCS3A01G393700.1 | Wheat | cytosol | 46.36 | 43.45 |
| OQU93258 | Sorghum | cytosol | 61.34 | 43.16 |
| TraesCS5A01G359200.1 | Wheat | cytosol, peroxisome, plastid | 44.94 | 42.37 |
| Zm00001d027621_P001 | Maize | cytosol | 61.13 | 40.37 |
| TraesCS7A01G423300.1 | Wheat | cytosol | 48.18 | 40.2 |
| TraesCS1A01G421500.1 | Wheat | plastid | 45.34 | 35.61 |
| TraesCS2A01G364100.2 | Wheat | cytosol, mitochondrion | 42.71 | 30.32 |
| TraesCS6A01G227300.1 | Wheat | mitochondrion | 43.32 | 30.1 |
| TraesCS5A01G512800.2 | Wheat | mitochondrion | 40.49 | 28.29 |
| HORVU4Hr1G084380.2 | Barley | cytosol | 30.97 | 27.18 |
| TraesCS6A01G375500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 40.08 | 26.94 |
| TraesCS5A01G011500.1 | Wheat | cytosol | 25.3 | 25.0 |
| TraesCS4A01G484700.1 | Wheat | cytosol, unclear | 25.3 | 23.86 |
| TraesCS7A01G010300.1 | Wheat | nucleus, unclear | 25.3 | 23.86 |
| TraesCS5A01G011700.1 | Wheat | cytosol | 24.9 | 23.38 |
| TraesCS1A01G146700.1 | Wheat | mitochondrion | 30.57 | 23.27 |
| TraesCS6A01G006500.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 24.49 | 17.11 |
| TraesCS7A01G426800.1 | Wheat | cytosol, peroxisome, plasma membrane | 23.89 | 16.28 |
| TraesCS2A01G045100.1 | Wheat | peroxisome | 23.48 | 15.26 |
| TraesCS5A01G178300.1 | Wheat | mitochondrion | 15.38 | 14.42 |
| TraesCS5A01G011800.1 | Wheat | plastid | 23.08 | 13.43 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G513100.1 | EnsemblPlantsGene:TraesCS5A01G513100 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF72 | PFAM:PF00092 | PFAM:PF14624 |
| PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5A:-:676960486..676961970
Molecular Weight (calculated)
53464.5 Da
IEP (calculated)
6.402
GRAVY (calculated)
-0.174
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDITAAGGD PPRAPVDLVT VLDVSHSMSG QKLTLLKQAM RFVIANLSPD DRLSVVSFNM KARRVTRLVR MSEAGKALSV SAVESLTAGG CTDIAEGLRM
101: AAMVLDQRRH RNAVSSVMLL SDGQDNYIMM RHQESSGVQA NDYEDLVPTT FTRTCADGEW SVPIHTFGFG NDHDAAAMYI IAEATGGTFS FVENEAVIQD
201: AFAQCVGGLL SVVVQEARIV VACVHPGVRV MSLKSGSYES RIDKDGRAAT VWVGELYADE ERHFLLILTV PRAEATVGDT TALLNVSFSY RDAATGADVS
301: VSAKDTVVAR PEHAADAERS VEVEWERVRV DAAEDIVAAR AAAQRGEHQE AAAILKNHQR AVALSEAARD GAPVTVALEA ELQEMRRHVS NRQSYALSGR
401: AYMLSGMSAH QQQRATSRQM NLVDEISVES MAAPAAAPPV KLASNEPTLS YATPAMRAML LRSRRAREAS AEGRSYKLKK NMQEAPNTVS LRHH
101: AAMVLDQRRH RNAVSSVMLL SDGQDNYIMM RHQESSGVQA NDYEDLVPTT FTRTCADGEW SVPIHTFGFG NDHDAAAMYI IAEATGGTFS FVENEAVIQD
201: AFAQCVGGLL SVVVQEARIV VACVHPGVRV MSLKSGSYES RIDKDGRAAT VWVGELYADE ERHFLLILTV PRAEATVGDT TALLNVSFSY RDAATGADVS
301: VSAKDTVVAR PEHAADAERS VEVEWERVRV DAAEDIVAAR AAAQRGEHQE AAAILKNHQR AVALSEAARD GAPVTVALEA ELQEMRRHVS NRQSYALSGR
401: AYMLSGMSAH QQQRATSRQM NLVDEISVES MAAPAAAPPV KLASNEPTLS YATPAMRAML LRSRRAREAS AEGRSYKLKK NMQEAPNTVS LRHH
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.