CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027621_P001	Maize	cytosol	84.47	79.28
HORVU4Hr1G084370.1	Barley	cytosol	18.52	74.71
EER95529	Sorghum	nucleus	62.11	67.08
TraesCS2A01G358400.2	Wheat	cytosol, nucleus, peroxisome	59.54	64.01
TraesCS2B01G377900.1	Wheat	cytosol	57.98	63.0
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	57.69	62.69
TraesCS5A01G513100.1	Wheat	cytosol, plastid	43.16	61.34
TraesCS4B01G344200.1	Wheat	cytosol	62.96	61.3
TraesCS5A01G513000.1	Wheat	cytosol	63.82	60.54
TraesCS4D01G339300.1	Wheat	cytosol	64.39	60.35
HORVU4Hr1G084330.1	Barley	cytosol	62.68	58.2
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	57.83	55.31
EER91508	Sorghum	cytosol, plastid	50.14	54.4
EER91509	Sorghum	nucleus	42.59	51.2
OQU90497	Sorghum	cytosol	35.61	48.54
OQU79988	Sorghum	cytosol	36.47	47.32
OQU91675	Sorghum	cytosol	41.31	46.62
OQU85324	Sorghum	mitochondrion	41.45	41.39
OQU93256	Sorghum	mitochondrion	39.74	39.97
EER91513	Sorghum	mitochondrion	39.32	39.2
OQU81931	Sorghum	mitochondrion	38.32	38.59
HORVU4Hr1G084380.2	Barley	cytosol	29.06	36.23
OQU85917	Sorghum	nucleus	38.03	36.23
EES11757	Sorghum	cytosol	19.8	26.78
EES10354	Sorghum	plastid	16.95	25.0
EER87790	Sorghum	endoplasmic reticulum, extracellular	21.65	23.9
EES05180	Sorghum	mitochondrion	12.39	23.58
KXG25767	Sorghum	mitochondrion	15.53	23.29
KXG20893	Sorghum	cytosol, plastid	20.23	23.24
KXG38506	Sorghum	cytosol	10.83	22.49
OQU89212	Sorghum	cytosol	17.09	21.47
OQU75754	Sorghum	mitochondrion, plastid	18.66	21.16
OQU81040	Sorghum	peroxisome	18.23	17.9

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	UniProt:A0A1Z5SBG0	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	EnsemblPlants:OQU93258	ProteinID:OQU93258	ProteinID:OQU93258.1	PFAM:PF00092
PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72
SMART:SM00184	SMART:SM00327	EnsemblPlantsGene:SORBI_3001G508532	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI000B8B9993
InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf

Description

hypothetical protein

Coordinates

chr1:-:77655065..77658467

Molecular Weight (calculated)

74226.0 Da

IEP (calculated)

5.341

GRAVY (calculated)

-0.304

Length

702 amino acids

Sequence
(BLAST)

001: MEGPQQSNPC AICLSAMGAD GGQAIFTAEC SHTFHFHCIS ASVAHGNLVC PLCNARWREL PSVRPSQPSS MPPTLPRQPL PRMVPMHGVQ PPPVPAGQPL
101: PQPAEPEVFD DDDEVELPSG EDNQRQATAS SGMLAVKTHV EFSAVARDSS QDHFAVLVHV KAPGVIVNEA AAGDRDAPRA PLDLVTVLDV SGSMRWDKLA
201: LVKQAMGFVI GSLGPHDRLS VVSFSSGARR VTRLLRMSHT GKSLATEAVE SLRAGGGTNI AEGLRTAAKV LGERRHRNAV SSVILLSDGH DNYSMPRRAR
301: GGVPPNYEVL VPPSFVPGTA STGEGSAPIH TFGFGNDHDA AAMHVVAEAT GGTFSFIENE AVIQDAFAQC IGGLLTVVAQ EARVAIACGH PGVRISSVKS
401: GRYESRVDED GRSASIAVGE LYADEERRFL LFLTVPPVEA TDGDDTLLLK ARCSYREAAG GTHVDVTAED TVVARPEHAA DAERSAEVVR ERERVEAIED
501: MAAARAAAER GAHQEAAEIL GNRGRAMARA AERVGVYRNG LGPLRAEVRH MRKRVANRES YERSGRAYVL AGLSSHEQQR ATTRQLRPLQ SVVQPSAGSV
601: GGAEATNSEA DAGDVEALDL DTDLMEYSDV GGPAGEAGTS NAASADAASN EAEAAASYLT PAMRAMLLRS RQAREAAAEQ QQQPKAAEEA ESSAASKEVA
701: EQ

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.