Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91509 | Sorghum | nucleus | 65.59 | 69.86 |
| OQU90497 | Sorghum | cytosol | 44.05 | 53.2 |
| OQU79988 | Sorghum | cytosol | 44.37 | 51.02 |
| EER95529 | Sorghum | nucleus | 49.52 | 47.38 |
| EER91508 | Sorghum | cytosol, plastid | 47.75 | 45.9 |
| OQU93258 | Sorghum | cytosol | 46.62 | 41.31 |
| OQU93256 | Sorghum | mitochondrion | 41.0 | 36.53 |
| Os10t0464800-00 | Rice | nucleus | 54.18 | 35.51 |
| OQU85324 | Sorghum | mitochondrion | 39.71 | 35.14 |
| EER91513 | Sorghum | mitochondrion | 39.23 | 34.66 |
| OQU81931 | Sorghum | mitochondrion | 37.62 | 33.57 |
| OQU85917 | Sorghum | nucleus | 37.94 | 32.02 |
| EES11757 | Sorghum | cytosol | 21.86 | 26.2 |
| EES10354 | Sorghum | plastid | 17.52 | 22.9 |
| EES05180 | Sorghum | mitochondrion | 13.34 | 22.49 |
| KXG25767 | Sorghum | mitochondrion | 16.88 | 22.44 |
| KXG20893 | Sorghum | cytosol, plastid | 21.54 | 21.93 |
| KXG38506 | Sorghum | cytosol | 11.9 | 21.89 |
| EER87790 | Sorghum | endoplasmic reticulum, extracellular | 21.22 | 20.75 |
| OQU89212 | Sorghum | cytosol | 17.36 | 19.32 |
| OQU75754 | Sorghum | mitochondrion, plastid | 18.81 | 18.9 |
| OQU81040 | Sorghum | peroxisome | 20.58 | 17.9 |
Protein Annotations
| Gene3D:3.30.40.10 | Gene3D:3.40.50.410 | MapMan:35.1 | UniProt:A0A1Z5S7G3 | InterPro:IPR001841 | InterPro:IPR002035 |
| InterPro:IPR013083 | InterPro:IPR036465 | EnsemblPlants:OQU91675 | ProteinID:OQU91675 | ProteinID:OQU91675.1 | PFAM:PF00092 |
| PFAM:PF14624 | PFAM:PF17123 | PFscan:PS50089 | PFscan:PS50234 | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF72 |
| SMART:SM00184 | SMART:SM00327 | EnsemblPlantsGene:SORBI_3001G226900 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI000B8BB1ED |
| InterPro:VWF_A | InterPro:Vwaint_dom | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf |
Description
hypothetical protein
Coordinates
chr1:+:21720810..21722708
Molecular Weight (calculated)
65949.3 Da
IEP (calculated)
6.624
GRAVY (calculated)
-0.282
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASASADP CGICLGDISR GQAVFVAECS HTFHHRCISN NVARGNHDCP LCKVTWRDLP ATIDPVAPAP PRKYADDDET VVAQGVVQAQ ADAAGLAAHV
101: GEMALKTYCE FPAVARDVPR DNFAVVVHVR APDHQAGGVA ADEVRAPLDL VTVLDVSGSM EGRKLALLKQ AMGFVIDNLG PADRLSIVSF STEASRKIRL
201: TRMSSDGKAS AKRAVESLVA NGLTNISKGL LVASEVLADR RYRNAVASVI LLSDGQDNKS GVGRNHQNLV PALFRDADNR PGPIHTFGFG ADHDSVAMHT
301: IAEVACGTFA FVENQEVVQD SFAQCIGGLL SVAVQDASLA VTCVHPGVRV REVKSGRYGN LVGEDGRAAS VDVGELYADE ERRFLLFLDV PRAEAAEEVT
401: CLMKLSCTYR DTVTGRAVDV AGEDAIVQRP VEVANPEASM EVERERVRVA AAEDIAVARA AAERGEHAEA ARILQRRRQS VLQSAPGRAG AFDALVEELQ
501: DFGARVEDEA EYKRTGRACM LTGISTHAQQ RGTLLACARK SAQPYTTRKA KKMVEKSRAQ RQQEQQSSAP APKKRKISGS SSSGGGGSES SSSSGSERST
601: SSSSSSGSER STSSSSSSDN SN
101: GEMALKTYCE FPAVARDVPR DNFAVVVHVR APDHQAGGVA ADEVRAPLDL VTVLDVSGSM EGRKLALLKQ AMGFVIDNLG PADRLSIVSF STEASRKIRL
201: TRMSSDGKAS AKRAVESLVA NGLTNISKGL LVASEVLADR RYRNAVASVI LLSDGQDNKS GVGRNHQNLV PALFRDADNR PGPIHTFGFG ADHDSVAMHT
301: IAEVACGTFA FVENQEVVQD SFAQCIGGLL SVAVQDASLA VTCVHPGVRV REVKSGRYGN LVGEDGRAAS VDVGELYADE ERRFLLFLDV PRAEAAEEVT
401: CLMKLSCTYR DTVTGRAVDV AGEDAIVQRP VEVANPEASM EVERERVRVA AAEDIAVARA AAERGEHAEA ARILQRRRQS VLQSAPGRAG AFDALVEELQ
501: DFGARVEDEA EYKRTGRACM LTGISTHAQQ RGTLLACARK SAQPYTTRKA KKMVEKSRAQ RQQEQQSSAP APKKRKISGS SSSGGGGSES SSSSGSERST
601: SSSSSSGSER STSSSSSSDN SN
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.