Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045456_P001 | Maize | endoplasmic reticulum, plasma membrane | 68.98 | 70.93 |
| Os11t0687200-02 | Rice | golgi | 41.68 | 43.14 |
| Os06t0578700-01 | Rice | golgi | 39.58 | 42.1 |
| EER87790 | Sorghum | endoplasmic reticulum, extracellular | 39.42 | 38.36 |
| KXG25767 | Sorghum | mitochondrion | 16.96 | 22.44 |
| EES05180 | Sorghum | mitochondrion | 13.09 | 21.95 |
| OQU79988 | Sorghum | cytosol | 19.06 | 21.81 |
| EES11757 | Sorghum | cytosol | 18.09 | 21.58 |
| KXG38506 | Sorghum | cytosol | 11.31 | 20.71 |
| OQU90497 | Sorghum | cytosol | 16.8 | 20.19 |
| EER95529 | Sorghum | nucleus | 21.0 | 20.0 |
| EES10354 | Sorghum | plastid | 15.35 | 19.96 |
| EER91509 | Sorghum | nucleus | 18.74 | 19.86 |
| OQU85324 | Sorghum | mitochondrion | 21.49 | 18.92 |
| EER91508 | Sorghum | cytosol, plastid | 19.71 | 18.86 |
| OQU91675 | Sorghum | cytosol | 18.9 | 18.81 |
| OQU93258 | Sorghum | cytosol | 21.16 | 18.66 |
| OQU85917 | Sorghum | nucleus | 21.32 | 17.91 |
| EER91513 | Sorghum | mitochondrion | 20.19 | 17.76 |
| KXG20893 | Sorghum | cytosol, plastid | 17.45 | 17.68 |
| OQU93256 | Sorghum | mitochondrion | 19.87 | 17.62 |
| OQU81931 | Sorghum | mitochondrion | 19.06 | 16.93 |
| OQU81040 | Sorghum | peroxisome | 12.12 | 10.49 |
| OQU89212 | Sorghum | cytosol | 8.72 | 9.66 |
| GSMUA_Achr4P06340_001 | Banana | mitochondrion | 0.32 | 1.04 |
Protein Annotations
| EnsemblPlants:OQU75754 | EnsemblPlantsGene:SORBI_3010G023500 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF57 | PFAM:PF13768 | PFscan:PS50234 | ProteinID:OQU75754 |
| ProteinID:OQU75754.1 | SEG:seg | SignalP:SignalP-TM | SMART:SM00327 | SUPFAM:SSF53300 | TMHMM:TMhelix |
| UniParc:UPI0002207335 | UniProt:A0A1W0VR56 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:1906496..1908653
Molecular Weight (calculated)
66682.1 Da
IEP (calculated)
5.562
GRAVY (calculated)
0.027
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTNIRLFHA KKMHTTSRVL PVPMTWLVFT LLLSSVAAAA ETVKVITTPV FAQIPRFQSS KDFQVLVRVE APPAAQQQRR VPIDLAVVLD VGTGPVRLDA
101: VKKAVKFIIR QIHDDDRVAV VGPSSNSRLV TGFLSTRDAR RDAENSVDEL EPRGEFTSGA GAGLEEAIKI LRELPATESR SSRARARFII LVTDAATTEA
201: SNRFSKLPRE DLPPVHTLGL GAAYDPRALL YIASESQGTY SFVDDDDTDG ITGAIAVCLS GLKDVVAVGT RVRVEAPLGI TIERIDSGGY MTSPVTRDEK
301: ASGEVAVGVL YAGEVKSFIV HLSVPALPST TTAMTSLDGG CDKQQLLTTS FIGHYTTSDE EDAAGAAPAS PSPTVTQAIL YVQRPPPEAM DGTLQRVPVP
401: VVMNHIARFD LLEMVTTFVN KEIGRLTSSN TVEVAAKLRI QWEQFVQARQ FWSGLDLGVL DVEVNRMVSI LEEPAGRGRT RSGSSSTAYM LSWLSSYQMQ
501: RPTAMGSPGS VAAAFVTVNM QLMLQQATIV TTGAPLCVDG GCPACECRCE EERCVQPLPP PVLVPSGRGD DTFRVNPVYP QDVLFNAINQ AMKHMYLALV
601: QASNLTRCDA AAGLEVLPA
101: VKKAVKFIIR QIHDDDRVAV VGPSSNSRLV TGFLSTRDAR RDAENSVDEL EPRGEFTSGA GAGLEEAIKI LRELPATESR SSRARARFII LVTDAATTEA
201: SNRFSKLPRE DLPPVHTLGL GAAYDPRALL YIASESQGTY SFVDDDDTDG ITGAIAVCLS GLKDVVAVGT RVRVEAPLGI TIERIDSGGY MTSPVTRDEK
301: ASGEVAVGVL YAGEVKSFIV HLSVPALPST TTAMTSLDGG CDKQQLLTTS FIGHYTTSDE EDAAGAAPAS PSPTVTQAIL YVQRPPPEAM DGTLQRVPVP
401: VVMNHIARFD LLEMVTTFVN KEIGRLTSSN TVEVAAKLRI QWEQFVQARQ FWSGLDLGVL DVEVNRMVSI LEEPAGRGRT RSGSSSTAYM LSWLSSYQMQ
501: RPTAMGSPGS VAAAFVTVNM QLMLQQATIV TTGAPLCVDG GCPACECRCE EERCVQPLPP PVLVPSGRGD DTFRVNPVYP QDVLFNAINQ AMKHMYLALV
601: QASNLTRCDA AAGLEVLPA
001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
Arabidopsis Description
Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.