Factsheet for Os06t0578700-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0687200-02	Rice	golgi	84.02	81.77
OQU75754	Sorghum	mitochondrion, plastid	42.1	39.58
Zm00001d036068_P001	Maize	mitochondrion, plastid	36.6	38.66
Zm00001d045456_P001	Maize	endoplasmic reticulum, plasma membrane	39.86	38.54
Zm00001d036072_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	41.58	38.41
Os11t0687100-01	Rice	nucleus	41.75	38.39
Os04t0266700-00	Rice	cytosol	7.39	37.72
Zm00001d036066_P001	Maize	cytosol	41.07	35.94
Os06t0578100-00	Rice	nucleus	39.69	34.68
Os11t0679000-00	Rice	cytosol	24.4	24.48
Os11t0650600-00	Rice	cytosol	22.51	23.02
Os11t0650500-00	Rice	cytosol	20.1	19.8
Os12t0431700-00	Rice	cytosol	6.7	18.84
Os03t0403600-01	Rice	cytosol, extracellular	13.4	18.75
Os04t0508800-01	Rice	plasma membrane	22.16	18.22
Os02t0619600-01	Rice	mitochondrion	22.16	18.19
Os12t0203500-00	Rice	vacuole	16.84	17.88
Os03t0142500-01	Rice	plasma membrane	20.96	17.58
Os08t0126100-00	Rice	nucleus	20.79	17.19
Os02t0806700-01	Rice	nucleus	20.45	16.46
Os08t0126000-00	Rice	plastid	20.27	15.59
Os01t0640200-00	Rice	cytosol	15.81	14.7
Os10t0464800-00	Rice	nucleus	20.62	12.64
Os04t0101800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	14.6	12.34
Os10t0464500-00	Rice	extracellular, plasma membrane	9.45	11.32
Os09t0298500-01	Rice	nucleus	9.79	10.71
GSMUA_Achr4P06340_001	Banana	mitochondrion	0.17	0.52

Protein Annotations

Gene3D:3.40.50.410	MapMan:35.2	EntrezGene:9267358	EMBL:AK243263	UniProt:B7FA66	ProteinID:BAH93591.1
ProteinID:BAS98360.1	ProteinID:EEE65925.1	InterPro:IPR002035	InterPro:IPR036465	EnsemblPlantsGene:Os06g0578700	EnsemblPlants:Os06t0578700-01
PFAM:PF13768	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF57	SMART:SM00327	SUPFAM:SSF53300
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000188B040	InterPro:VWF_A	RefSeq:XP_015642827.1	SEG:seg
InterPro:vWFA_dom_sf	:	:	:	:	:

Description

von Willebrand factor, type A domain containing protein. (Os06t0578700-01)

Coordinates

chr6:+:22522400..22526017

Molecular Weight (calculated)

62551.5 Da

IEP (calculated)

5.148

GRAVY (calculated)

0.171

Length

582 amino acids

Sequence
(BLAST)

001: MGRLHNLLLL LVCFFSTLLL AQVMSAAAGM AAVKVSTTPI FSKIPRAQTT KDFQVLLRIE APPLVDLKGR VPIDLVMVLD VDVESVSLEP VKKAMKFAIQ
101: QLSDKDSIAI FGPSMSREVI PKFMSIHGSR RVAEKKVDEL EGRRIAGPAR SSLDEALKML EEQPASSSDG RAKFIVLVTD GEDITRFNSG MPEWFTAALA
201: KYPVHAFGLG ASHDAAALRL IAQRSHGTYS FLDDGNVDKV ASALALCLGG LKSVAAVGAR VVLKAASGSG VRIDRISSGD YASSVSQVDG GASGEIVIGA
301: LYAGEVKSFV VHLYVPAAPP ALRTVEGVCC DQQQLLVASL DGQLYTSGGV DVDDAAAPVD LVVERPNAAV LVPSAIVVNQ IFQFSVLKMF DTFIDKEILH
401: RTPVTGWNDV DVDDLGRKLL ARWEELVLEH QFWVGLDLGS LDGEITAVAN SLSKQYIVGT AYIFSWMSSY KMQRPTAMGS PANVVGVFVT LEVHLTLQVA
501: ITLPESGGDE GECHECEYTC EKQLPPAPPL LEASGHDGSS YRLNAAYEGV VSLDDINQFM IKIYQGMVKA NNLKQCQPRA VA

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.