Factsheet for Os03t0403600-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
YLoc:	cytosol

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024014_P001	Maize	cytosol	50.0	41.35
Zm00001d024886_P002	Maize	cytosol	50.48	40.7
Os01t0640200-00	Rice	cytosol	57.21	38.02
Os04t0266700-00	Rice	cytosol	6.97	25.44
Os12t0431700-00	Rice	cytosol	9.13	18.36
Os03t0142500-01	Rice	plasma membrane	24.28	14.55
Os11t0687100-01	Rice	nucleus	21.88	14.38
Os04t0508800-01	Rice	plasma membrane	24.28	14.27
Os02t0619600-01	Rice	mitochondrion	24.28	14.25
Os08t0126100-00	Rice	nucleus	23.08	13.64
Os06t0578100-00	Rice	nucleus	21.63	13.51
Os06t0578700-01	Rice	golgi	18.75	13.4
Os12t0203500-00	Rice	vacuole	17.55	13.32
Os11t0679000-00	Rice	cytosol	18.51	13.28
Os11t0687200-02	Rice	golgi	18.51	12.88
Os02t0806700-01	Rice	nucleus	22.36	12.86
Os08t0126000-00	Rice	plastid	23.08	12.68
Os11t0650600-00	Rice	cytosol	16.59	12.13
Os11t0650500-00	Rice	cytosol	16.35	11.51
Os10t0464800-00	Rice	nucleus	23.8	10.43
Os04t0101800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	14.66	8.85
Os09t0298500-01	Rice	nucleus	10.1	7.89
Os10t0464500-00	Rice	extracellular, plasma membrane	8.17	7.0

Protein Annotations

EnsemblPlants:Os03t0403600-01	EnsemblPlantsGene:Os03g0403600	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:vWFA_dom_sf	ncoils:Coil	PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	PFAM:PF00092
PFAM:PF14624	ProteinID:BAF12239.1	ProteinID:BAS84622.1	SEG:seg	SUPFAM:SSF53300	UniParc:UPI0000E120CB
UniProt:Q0DR99	MapMan:35.2	:	:	:	:

Description

von Willebrand factor, type A domain containing protein. (Os03t0403600-01)

Coordinates

chr3:+:16457908..16459449

Molecular Weight (calculated)

44266.0 Da

IEP (calculated)

4.562

GRAVY (calculated)

-0.201

Length

416 amino acids

Sequence
(BLAST)

001: AGDAARADLG ALVDGLAADG NTNIRAGLEI GLAVAAGRRL TAGRAVNVML MSDGQQNRGD ATRLDPGGVP VHTFGLGADH DPAVLQAIAG KSREGMFHYV
101: ADGVNLTAPF SQLLGGLLTI IAQDLELTVT RVDGEAAIKK VDAGTYPQAA AADGSSVTVQ FGTLYSAEVR RVLVYLALED STAFPPYDAE VVEAQFRYSL
201: QGATVASNPD PVSIRRSGSA PEPSEEAPAR KPEVETEMAR RRHAESIREA RSMADGKELE RARTRLVEAQ NALEDVLDQA NPMVDMLREE LLQLLRLMET
301: QEAYERAGRA YAVSSLASHD RQRFAARGDA EGVRLFATPR MDAYLEQAWR FDEDPGGAAL PSAEEDVRQE VAANPLAPVA GQIAFYVRSA IQALQAIDKI
401: FASVAAATST STSTST

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.