Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0403600-01 | Rice | cytosol, extracellular | 38.02 | 57.21 |
| Zm00001d024886_P002 | Maize | cytosol | 37.06 | 44.96 |
| Zm00001d024014_P001 | Maize | cytosol | 35.78 | 44.53 |
| Os12t0431700-00 | Rice | cytosol | 13.42 | 40.58 |
| Os04t0266700-00 | Rice | cytosol | 4.95 | 27.19 |
| Os03t0142500-01 | Rice | plasma membrane | 22.2 | 20.03 |
| Os02t0619600-01 | Rice | mitochondrion | 22.36 | 19.75 |
| Os12t0203500-00 | Rice | vacuole | 16.61 | 18.98 |
| Os04t0508800-01 | Rice | plasma membrane | 21.09 | 18.64 |
| Os08t0126100-00 | Rice | nucleus | 20.77 | 18.47 |
| Os11t0687100-01 | Rice | nucleus | 18.53 | 18.33 |
| Os02t0806700-01 | Rice | nucleus | 20.45 | 17.7 |
| Os11t0650500-00 | Rice | cytosol | 16.13 | 17.09 |
| Os11t0679000-00 | Rice | cytosol | 15.81 | 17.07 |
| Os06t0578100-00 | Rice | nucleus | 17.41 | 16.37 |
| Os08t0126000-00 | Rice | plastid | 19.65 | 16.25 |
| Os11t0687200-02 | Rice | golgi | 15.18 | 15.89 |
| Os06t0578700-01 | Rice | golgi | 14.7 | 15.81 |
| Os11t0650600-00 | Rice | cytosol | 13.74 | 15.11 |
| Os10t0464500-00 | Rice | extracellular, plasma membrane | 11.18 | 14.4 |
| Os09t0298500-01 | Rice | nucleus | 11.18 | 13.16 |
| Os10t0464800-00 | Rice | nucleus | 19.81 | 13.07 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 14.38 | 13.06 |
Protein Annotations
| Gene3D:3.40.50.410 | MapMan:35.2 | UniProt:A0A0P0V5S3 | ProteinID:BAS73362.1 | InterPro:CASP_dom | ncoils:Coil |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002035 |
| InterPro:IPR036465 | EnsemblPlantsGene:Os01g0640200 | EnsemblPlants:Os01t0640200-00 | PFAM:PF00092 | PFAM:PF04535 | PFAM:PF14624 |
| PFscan:PS50234 | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF64 | SMART:SM00327 | SUPFAM:SSF53300 | TMHMM:TMhelix |
| UniParc:UPI000393C0B8 | InterPro:VWF_A | InterPro:Vwaint_dom | SEG:seg | InterPro:vWFA_dom_sf | : |
Description
Similar to UPF0497 membrane protein Sb03g029220. (Os01t0640200-00)
Coordinates
chr1:-:25718967..25724624
Molecular Weight (calculated)
68449.2 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.254
Length
626 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYNDDEQTA PTSTATEPAR PTVGITGQLV KQVRLNKYHN DVASMAPHDQ ELLLELRGSS SSTDRAGLDL VAVIDVSGSM DGDRIDKVKT ALQFVIRKLS
101: DLDRLCIVTF CTNATRLCPL RFVTAAAQAE LKALVDGLKA YGDTNMKGGL ETGMSVVDGR SLAAGRAVSV MLMSDGYQNH GGDARDVHLK NVPVYTFSFG
201: ASHDSNLLEA IARKSLGGTF NYVADSANLT GPFSQLLGGL LTIIAQDLEL TVTRFHGEVT IKRVVWVDAG TYPQTTASDG SSVTVSFGTL YSAEARRVIV
301: YLALADKTAS PPYDANVCLA QYRFTFQAQQ VTSNPDLITI KRRPSAAPGA ARKPQPVENE LARRQHADMI RAARDMAEAN KMEDARNKLE EARKALEENF
401: NQAANPTVAM LLEELRQLRG LMERQYLYNK EGRPYAASSL ASHDRQRVAT RGQADGVRLY TTPHMDTYLK QAEQFEKNPD EAPPPATKHV PEPDQVVDQE
501: PPAPPAEADV VPDVPRDMAA GDRRTLSAAL RVAAAVLSLA AFVLMASVRT SGWDSDRYDL YEQYYRYALG VNLIVCVYST AQAVVEIGRL ISPRFAASLN
601: PITYCVSLFL DQASPIHTIH RCWRTS
101: DLDRLCIVTF CTNATRLCPL RFVTAAAQAE LKALVDGLKA YGDTNMKGGL ETGMSVVDGR SLAAGRAVSV MLMSDGYQNH GGDARDVHLK NVPVYTFSFG
201: ASHDSNLLEA IARKSLGGTF NYVADSANLT GPFSQLLGGL LTIIAQDLEL TVTRFHGEVT IKRVVWVDAG TYPQTTASDG SSVTVSFGTL YSAEARRVIV
301: YLALADKTAS PPYDANVCLA QYRFTFQAQQ VTSNPDLITI KRRPSAAPGA ARKPQPVENE LARRQHADMI RAARDMAEAN KMEDARNKLE EARKALEENF
401: NQAANPTVAM LLEELRQLRG LMERQYLYNK EGRPYAASSL ASHDRQRVAT RGQADGVRLY TTPHMDTYLK QAEQFEKNPD EAPPPATKHV PEPDQVVDQE
501: PPAPPAEADV VPDVPRDMAA GDRRTLSAAL RVAAAVLSLA AFVLMASVRT SGWDSDRYDL YEQYYRYALG VNLIVCVYST AQAVVEIGRL ISPRFAASLN
601: PITYCVSLFL DQASPIHTIH RCWRTS
001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
Arabidopsis Description
Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.