Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6D01G207700.2 | Wheat | mitochondrion | 84.77 | 84.65 |
HORVU6Hr1G057680.2 | Barley | cytosol, mitochondrion, nucleus | 84.77 | 84.41 |
TraesCS6B01G254400.1 | Wheat | mitochondrion | 84.2 | 84.08 |
TraesCS6A01G227300.1 | Wheat | mitochondrion | 84.2 | 83.97 |
Zm00001d017247_P002 | Maize | mitochondrion | 81.81 | 83.33 |
OQU85324 | Sorghum | mitochondrion | 81.95 | 82.65 |
Zm00001d051119_P001 | Maize | nucleus | 78.42 | 80.81 |
Os04t0508800-01 | Rice | plasma membrane | 70.38 | 70.48 |
GSMUA_Achr5P20480_001 | Banana | mitochondrion | 52.89 | 59.15 |
GSMUA_Achr11P... | Banana | mitochondrion | 51.48 | 58.4 |
GSMUA_Achr1P03470_001 | Banana | mitochondrion, plastid | 51.2 | 56.72 |
VIT_13s0019g04440.t01 | Wine grape | endoplasmic reticulum | 54.73 | 54.65 |
CDY31517 | Canola | extracellular, mitochondrion, plastid | 45.84 | 54.35 |
VIT_06s0004g02630.t01 | Wine grape | mitochondrion, nucleus | 55.43 | 53.91 |
CDY52708 | Canola | extracellular, mitochondrion, plastid | 45.13 | 53.16 |
Os02t0806700-01 | Rice | nucleus | 53.31 | 52.28 |
Bra020234.1-P | Field mustard | mitochondrion | 51.06 | 52.09 |
GSMUA_Achr11P... | Banana | mitochondrion | 39.35 | 51.86 |
PGSC0003DMT400059986 | Potato | nucleus | 53.17 | 51.86 |
Os04t0266700-00 | Rice | cytosol | 8.32 | 51.75 |
Bra005066.1-P | Field mustard | mitochondrion | 47.67 | 51.52 |
Solyc05g056140.2.1 | Tomato | nucleus | 52.89 | 51.51 |
AT5G60710.1 | Thale cress | extracellular, mitochondrion, plastid | 51.06 | 51.42 |
CDX91506 | Canola | mitochondrion | 43.72 | 50.99 |
CDX74871 | Canola | mitochondrion | 43.86 | 50.98 |
Os03t0142500-01 | Rice | plasma membrane | 49.51 | 50.58 |
PGSC0003DMT400020896 | Potato | mitochondrion, plastid | 52.05 | 50.34 |
Bra002456.1-P | Field mustard | mitochondrion, plastid | 49.65 | 50.29 |
Solyc11g069600.1.1 | Tomato | plastid | 51.9 | 50.2 |
AT2G38970.1 | Thale cress | mitochondrion | 48.94 | 50.14 |
CDY72156 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 37.8 | 49.72 |
CDY67781 | Canola | cytosol | 36.67 | 49.15 |
CDY32819 | Canola | cytosol | 40.76 | 47.85 |
Bra030712.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus, plastid | 40.76 | 47.3 |
AT1G08050.1 | Thale cress | plastid | 42.31 | 46.8 |
AT3G54780.4 | Thale cress | endoplasmic reticulum, extracellular, plastid | 44.57 | 46.33 |
CDX93597 | Canola | cytosol | 40.2 | 44.32 |
CDX95099 | Canola | cytosol | 34.56 | 43.59 |
GSMUA_Achr2P11780_001 | Banana | golgi | 28.91 | 43.43 |
Os08t0126100-00 | Rice | nucleus | 37.09 | 37.36 |
Os12t0203500-00 | Rice | vacuole | 28.07 | 36.31 |
Os12t0431700-00 | Rice | cytosol | 9.59 | 32.85 |
Os08t0126000-00 | Rice | plastid | 34.7 | 32.5 |
Os10t0464500-00 | Rice | extracellular, plasma membrane | 21.16 | 30.86 |
Os10t0464800-00 | Rice | nucleus | 37.09 | 27.71 |
Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 23.7 | 24.38 |
Os03t0403600-01 | Rice | cytosol, extracellular | 14.25 | 24.28 |
Os11t0687100-01 | Rice | nucleus | 21.44 | 24.01 |
Os09t0298500-01 | Rice | nucleus | 17.77 | 23.68 |
Os11t0650600-00 | Rice | cytosol | 18.62 | 23.2 |
Os11t0650500-00 | Rice | cytosol | 19.18 | 23.01 |
Os01t0640200-00 | Rice | cytosol | 19.75 | 22.36 |
Os06t0578700-01 | Rice | golgi | 18.19 | 22.16 |
Os06t0578100-00 | Rice | nucleus | 20.45 | 21.77 |
Bra018663.1-P | Field mustard | nucleus | 39.63 | 21.3 |
Os11t0687200-02 | Rice | golgi | 17.91 | 21.24 |
Os11t0679000-00 | Rice | cytosol | 17.21 | 21.03 |
Protein Annotations
Gene3D:3.30.40.10 | Gene3D:3.40.50.410 | MapMan:35.1 | EntrezGene:4330003 | EMBL:AK072178 | ProteinID:BAD21564.1 |
ProteinID:BAD21612.1 | ProteinID:BAF09365.1 | ProteinID:BAS79811.1 | ProteinID:EEE57389.1 | InterPro:IPR001841 | InterPro:IPR002035 |
InterPro:IPR013083 | InterPro:IPR036465 | EnsemblPlantsGene:Os02g0619600 | EnsemblPlants:Os02t0619600-01 | PFAM:PF00092 | PFAM:PF13639 |
PFAM:PF14624 | PFscan:PS50089 | PFscan:PS50234 | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF49 | UniProt:Q6K937 |
SMART:SM00184 | SMART:SM00327 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI0000377C3F | InterPro:VWF_A |
InterPro:Vwaint_dom | RefSeq:XP_015622806.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf |
Description
RING finger protein OsRFPH2-15, RING-H2 protein 15Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0619600-01)
Coordinates
chr2:-:24645508..24650999
Molecular Weight (calculated)
77045.5 Da
IEP (calculated)
8.446
GRAVY (calculated)
-0.325
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGMWRKAKK ALGAGLCVRL PAVAGDWEDG VSERRASDAL SHDASSAAAA HVSAPNTPAA ALPGAGPLRR SKSGTKSAKG MCAICFDPMK SGHGQALFTA
101: ECSHMFHFHC ISSSVKHGNY VCPVCRAKWK EIPFNRSLSS IVPRGRSGLN VNQARLPQQG TYMALLRQVP SHHREASGSH TSEPVDFNDD EPLQLIESGD
201: SRDARCSRAV EIKTYPEFSA IPQSSSEDDF AVLIHLKAPC ANPEQVTGRP FNATSIGYPT SRAPVDLVTV LDVSGSMAGT KLALLKRAMG FVIQHLGPSD
301: RLSVIAFSST ARRLFHLRRM SHSGRQQALQ AVNLLGAGGG TNIADALKKA AKVIEDRNYK NPVCSIILLS DGQDTYNISS NVRGTRPDYR SLVPSSILNH
401: TICTVPVHGF GFGADHDSDA LHSIAESSGG TFSFIEDESV IQDAFAQCIG GLLSVVVQDM RLTVECVHPS VQLHTIKSGS YLSKVAGDGR NGSIEVGHLY
501: ADEERDFLLS LSFPQSRDQT MLLKVACAYR DSVTNEAIKI HADEVKILRP KSPTSEPVCM EVDRERNRVR AADAIEAARA AAERGALSDA VAILEHCRRI
601: LSESFSRKSG DRLCISLDAE LKEMQDRMAS RQRYEASGRA YLLSGLSSHS WQRATTRGDS TDSTTLVYSY QTPSMVQMLQ RSQNQCPSPP GLRPQLRQTR
701: SLLEKPHPR
101: ECSHMFHFHC ISSSVKHGNY VCPVCRAKWK EIPFNRSLSS IVPRGRSGLN VNQARLPQQG TYMALLRQVP SHHREASGSH TSEPVDFNDD EPLQLIESGD
201: SRDARCSRAV EIKTYPEFSA IPQSSSEDDF AVLIHLKAPC ANPEQVTGRP FNATSIGYPT SRAPVDLVTV LDVSGSMAGT KLALLKRAMG FVIQHLGPSD
301: RLSVIAFSST ARRLFHLRRM SHSGRQQALQ AVNLLGAGGG TNIADALKKA AKVIEDRNYK NPVCSIILLS DGQDTYNISS NVRGTRPDYR SLVPSSILNH
401: TICTVPVHGF GFGADHDSDA LHSIAESSGG TFSFIEDESV IQDAFAQCIG GLLSVVVQDM RLTVECVHPS VQLHTIKSGS YLSKVAGDGR NGSIEVGHLY
501: ADEERDFLLS LSFPQSRDQT MLLKVACAYR DSVTNEAIKI HADEVKILRP KSPTSEPVCM EVDRERNRVR AADAIEAARA AAERGALSDA VAILEHCRRI
601: LSESFSRKSG DRLCISLDAE LKEMQDRMAS RQRYEASGRA YLLSGLSSHS WQRATTRGDS TDSTTLVYSY QTPSMVQMLQ RSQNQCPSPP GLRPQLRQTR
701: SLLEKPHPR
001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
Arabidopsis Description
Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]
SUBAcon: [mitochondrion,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.