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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 3
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G207700.2 Wheat mitochondrion 84.77 84.65
HORVU6Hr1G057680.2 Barley cytosol, mitochondrion, nucleus 84.77 84.41
TraesCS6B01G254400.1 Wheat mitochondrion 84.2 84.08
TraesCS6A01G227300.1 Wheat mitochondrion 84.2 83.97
Zm00001d017247_P002 Maize mitochondrion 81.81 83.33
OQU85324 Sorghum mitochondrion 81.95 82.65
Zm00001d051119_P001 Maize nucleus 78.42 80.81
Os04t0508800-01 Rice plasma membrane 70.38 70.48
GSMUA_Achr5P20480_001 Banana mitochondrion 52.89 59.15
GSMUA_Achr11P... Banana mitochondrion 51.48 58.4
GSMUA_Achr1P03470_001 Banana mitochondrion, plastid 51.2 56.72
VIT_13s0019g04440.t01 Wine grape endoplasmic reticulum 54.73 54.65
CDY31517 Canola extracellular, mitochondrion, plastid 45.84 54.35
VIT_06s0004g02630.t01 Wine grape mitochondrion, nucleus 55.43 53.91
CDY52708 Canola extracellular, mitochondrion, plastid 45.13 53.16
Os02t0806700-01 Rice nucleus 53.31 52.28
Bra020234.1-P Field mustard mitochondrion 51.06 52.09
GSMUA_Achr11P... Banana mitochondrion 39.35 51.86
PGSC0003DMT400059986 Potato nucleus 53.17 51.86
Os04t0266700-00 Rice cytosol 8.32 51.75
Bra005066.1-P Field mustard mitochondrion 47.67 51.52
Solyc05g056140.2.1 Tomato nucleus 52.89 51.51
AT5G60710.1 Thale cress extracellular, mitochondrion, plastid 51.06 51.42
CDX91506 Canola mitochondrion 43.72 50.99
CDX74871 Canola mitochondrion 43.86 50.98
Os03t0142500-01 Rice plasma membrane 49.51 50.58
PGSC0003DMT400020896 Potato mitochondrion, plastid 52.05 50.34
Bra002456.1-P Field mustard mitochondrion, plastid 49.65 50.29
Solyc11g069600.1.1 Tomato plastid 51.9 50.2
AT2G38970.1 Thale cress mitochondrion 48.94 50.14
CDY72156 Canola cytosol, endoplasmic reticulum, nucleus, plastid 37.8 49.72
CDY67781 Canola cytosol 36.67 49.15
CDY32819 Canola cytosol 40.76 47.85
Bra030712.1-P Field mustard cytosol, endoplasmic reticulum, nucleus, plastid 40.76 47.3
AT1G08050.1 Thale cress plastid 42.31 46.8
AT3G54780.4 Thale cress endoplasmic reticulum, extracellular, plastid 44.57 46.33
CDX93597 Canola cytosol 40.2 44.32
CDX95099 Canola cytosol 34.56 43.59
GSMUA_Achr2P11780_001 Banana golgi 28.91 43.43
Os08t0126100-00 Rice nucleus 37.09 37.36
Os12t0203500-00 Rice vacuole 28.07 36.31
Os12t0431700-00 Rice cytosol 9.59 32.85
Os08t0126000-00 Rice plastid 34.7 32.5
Os10t0464500-00 Rice extracellular, plasma membrane 21.16 30.86
Os10t0464800-00 Rice nucleus 37.09 27.71
Os04t0101800-01 Rice cytosol, mitochondrion, peroxisome, plastid 23.7 24.38
Os03t0403600-01 Rice cytosol, extracellular 14.25 24.28
Os11t0687100-01 Rice nucleus 21.44 24.01
Os09t0298500-01 Rice nucleus 17.77 23.68
Os11t0650600-00 Rice cytosol 18.62 23.2
Os11t0650500-00 Rice cytosol 19.18 23.01
Os01t0640200-00 Rice cytosol 19.75 22.36
Os06t0578700-01 Rice golgi 18.19 22.16
Os06t0578100-00 Rice nucleus 20.45 21.77
Bra018663.1-P Field mustard nucleus 39.63 21.3
Os11t0687200-02 Rice golgi 17.91 21.24
Os11t0679000-00 Rice cytosol 17.21 21.03
Protein Annotations
Gene3D:3.30.40.10Gene3D:3.40.50.410MapMan:35.1EntrezGene:4330003EMBL:AK072178ProteinID:BAD21564.1
ProteinID:BAD21612.1ProteinID:BAF09365.1ProteinID:BAS79811.1ProteinID:EEE57389.1InterPro:IPR001841InterPro:IPR002035
InterPro:IPR013083InterPro:IPR036465EnsemblPlantsGene:Os02g0619600EnsemblPlants:Os02t0619600-01PFAM:PF00092PFAM:PF13639
PFAM:PF14624PFscan:PS50089PFscan:PS50234PANTHER:PTHR10579PANTHER:PTHR10579:SF49UniProt:Q6K937
SMART:SM00184SMART:SM00327SUPFAM:SSF53300SUPFAM:SSF57850UniParc:UPI0000377C3FInterPro:VWF_A
InterPro:Vwaint_domRefSeq:XP_015622806.1InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:segInterPro:vWFA_dom_sf
Description
RING finger protein OsRFPH2-15, RING-H2 protein 15Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0619600-01)
Coordinates
chr2:-:24645508..24650999
Molecular Weight (calculated)
77045.5 Da
IEP (calculated)
8.446
GRAVY (calculated)
-0.325
Length
709 amino acids
Sequence
(BLAST)
001: MEGMWRKAKK ALGAGLCVRL PAVAGDWEDG VSERRASDAL SHDASSAAAA HVSAPNTPAA ALPGAGPLRR SKSGTKSAKG MCAICFDPMK SGHGQALFTA
101: ECSHMFHFHC ISSSVKHGNY VCPVCRAKWK EIPFNRSLSS IVPRGRSGLN VNQARLPQQG TYMALLRQVP SHHREASGSH TSEPVDFNDD EPLQLIESGD
201: SRDARCSRAV EIKTYPEFSA IPQSSSEDDF AVLIHLKAPC ANPEQVTGRP FNATSIGYPT SRAPVDLVTV LDVSGSMAGT KLALLKRAMG FVIQHLGPSD
301: RLSVIAFSST ARRLFHLRRM SHSGRQQALQ AVNLLGAGGG TNIADALKKA AKVIEDRNYK NPVCSIILLS DGQDTYNISS NVRGTRPDYR SLVPSSILNH
401: TICTVPVHGF GFGADHDSDA LHSIAESSGG TFSFIEDESV IQDAFAQCIG GLLSVVVQDM RLTVECVHPS VQLHTIKSGS YLSKVAGDGR NGSIEVGHLY
501: ADEERDFLLS LSFPQSRDQT MLLKVACAYR DSVTNEAIKI HADEVKILRP KSPTSEPVCM EVDRERNRVR AADAIEAARA AAERGALSDA VAILEHCRRI
601: LSESFSRKSG DRLCISLDAE LKEMQDRMAS RQRYEASGRA YLLSGLSSHS WQRATTRGDS TDSTTLVYSY QTPSMVQMLQ RSQNQCPSPP GLRPQLRQTR
701: SLLEKPHPR
Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)
001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
Arabidopsis Description
Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.