Factsheet for Zm00001d017247_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85324	Sorghum	mitochondrion	94.54	93.6
Zm00001d051119_P001	Maize	nucleus	89.08	90.12
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	84.91	83.01
TraesCS6D01G207700.2	Wheat	mitochondrion	84.63	82.96
TraesCS6A01G227300.1	Wheat	mitochondrion	84.48	82.7
TraesCS6B01G254400.1	Wheat	mitochondrion	84.34	82.68
Os02t0619600-01	Rice	mitochondrion	83.33	81.81
Zm00001d025825_P001	Maize	mitochondrion	66.95	66.19
GSMUA_Achr11P...	Banana	mitochondrion	52.87	58.88
GSMUA_Achr5P20480_001	Banana	mitochondrion	53.59	58.83
GSMUA_Achr1P03470_001	Banana	mitochondrion, plastid	52.73	57.34
VIT_13s0019g04440.t01	Wine grape	endoplasmic reticulum	55.89	54.79
VIT_06s0004g02630.t01	Wine grape	mitochondrion, nucleus	56.61	54.05
CDY31517	Canola	extracellular, mitochondrion, plastid	45.69	53.18
Zm00001d051977_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	55.6	52.94
CDY52708	Canola	extracellular, mitochondrion, plastid	45.26	52.33
PGSC0003DMT400059986	Potato	nucleus	54.45	52.13
GSMUA_Achr11P...	Banana	mitochondrion	40.23	52.04
Solyc05g056140.2.1	Tomato	nucleus	54.31	51.92
Zm00001d018428_P001	Maize	mitochondrion	54.89	51.69
Zm00001d027622_P001	Maize	mitochondrion	51.15	51.45
Bra005066.1-P	Field mustard	mitochondrion	48.42	51.37
CDX74871	Canola	mitochondrion	44.54	50.82
CDX91506	Canola	mitochondrion	44.25	50.66
AT5G60710.1	Thale cress	extracellular, mitochondrion, plastid	51.15	50.57
Bra020234.1-P	Field mustard	mitochondrion	50.14	50.22
AT2G38970.1	Thale cress	mitochondrion	49.71	50.0
Solyc11g069600.1.1	Tomato	plastid	52.59	49.93
Zm00001d032750_P001	Maize	plastid	44.97	49.84
PGSC0003DMT400020896	Potato	mitochondrion, plastid	52.44	49.8
Bra002456.1-P	Field mustard	mitochondrion, plastid	49.57	49.29
CDY72156	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	37.79	48.79
CDY67781	Canola	cytosol	36.64	48.2
CDY32819	Canola	cytosol	41.09	47.35
Zm00001d032753_P001	Maize	cytosol	43.39	47.04
Bra030712.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	41.24	46.97
AT1G08050.1	Thale cress	plastid	43.25	46.96
AT3G54780.4	Thale cress	endoplasmic reticulum, extracellular, plastid	45.55	46.48
Zm00001d014084_P001	Maize	mitochondrion	46.41	45.95
CDX93597	Canola	cytosol	41.09	44.48
CDX95099	Canola	cytosol	35.49	43.95
GSMUA_Achr2P11780_001	Banana	golgi	29.74	43.86
Zm00001d007190_P001	Maize	cytosol	29.89	41.52
Zm00001d008553_P001	Maize	cytosol	29.6	41.28
Zm00001d027621_P001	Maize	cytosol	42.1	39.17
Zm00001d024886_P002	Maize	cytosol	21.26	28.68
Zm00001d024014_P001	Maize	cytosol	19.83	27.44
Zm00001d051773_P001	Maize	plasma membrane	17.67	26.8
Zm00001d036068_P001	Maize	mitochondrion, plastid	18.68	23.59
Zm00001d024940_P001	Maize	peroxisome	24.86	23.47
Zm00001d004553_P001	Maize	peroxisome	25.14	23.33
Zm00001d020013_P001	Maize	cytosol	17.1	22.62
Zm00001d036072_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	19.68	21.75
Zm00001d036069_P001	Maize	endoplasmic reticulum, extracellular, vacuole	19.54	21.55
Bra018663.1-P	Field mustard	nucleus	40.66	21.46
Zm00001d045456_P001	Maize	endoplasmic reticulum, plasma membrane	18.39	21.26
Zm00001d045454_P001	Maize	plasma membrane	19.68	21.08
Zm00001d036066_P001	Maize	cytosol	18.82	19.7
Zm00001d035428_P001	Maize	mitochondrion	18.39	19.08
Zm00001d035434_P001	Maize	cytosol	11.78	17.86

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	UniProt:A0A1D6HD96	ProteinID:AQK72666.1	ProteinID:AQK72667.1
ProteinID:AQK72668.1	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	PFAM:PF00092
PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF49
SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI000220DDDF	InterPro:VWF_A
InterPro:Vwaint_dom	EnsemblPlantsGene:Zm00001d017247	EnsemblPlants:Zm00001d017247_P002	EnsemblPlants:Zm00001d017247_T002	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

Protein binding protein

Coordinates

chr5:-:190232717..190237401

Molecular Weight (calculated)

75449.7 Da

IEP (calculated)

8.531

GRAVY (calculated)

-0.302

Length

696 amino acids

Sequence
(BLAST)

001: MEGVWRKAKR ALGASLCVRL PAVAGDREDG ASERRASDAL SLDSTAAAHA SAPNTPAAPG TGALRRSKSG GKSSKRMCAI CFDSMKPGLG QALFTAECSH
101: MFHFHCISSS VKHGNHVCPV CRAKWKEIPF NRSLSSIVPR GRGGLNVNQA RLPQQGAYMA LLRQVPNRQR EGPVLVTSEP SDFNDDEPLH KMEPANIGSS
201: RTVEIKTYSE FSAIQQSSQD DFAVLIHLKA PYANPEQVIG RPVNATSVGY PTARAPVDLV TVLDVSGSMA GTKLALLKRA MGFVIQHLGP SDRLSVIAFS
301: STARRLFHLQ RMSHSGRQQA LQTVNSLVAS GGTNIADALK KAAKVIEDRS HQNPVCSIIL LSDGQDTYNI PSNIRGARPE YSSLVPSSIL NRTFGLVPVH
401: GFGFGVDHDS DALHSIAEAS GGTFSFIEDE GVIQDAFAQC IGGLLSVVVQ NMQVNVECVH PGVQLRSIKS GSYHSKVAAH GRNGSIDVGH LYADEERDFL
501: LSVSLPHCRE QTTLLKVACA YRDSLTNEEI KIQGGEVAIL RPRSPVSEPV CMEVDRERNR VRAADAIEAA RAAAERGALS DAVSILEDCR RILSETFSSR
601: SGDRLCMALD AELREMQERM ANRQRYEASG RAYLLSGLSS HSWQRATARG DSTDSDTLVY SYQTPSMVHM LQRSQNHCPS PQGPSQPRVL VKPQPR

Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)

001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR

Arabidopsis Description

Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.