Factsheet for Zm00001d036069_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87790	Sorghum	endoplasmic reticulum, extracellular	79.87	79.25
Zm00001d045454_P001	Maize	plasma membrane	78.92	76.62
Os11t0687100-01	Rice	nucleus	57.05	56.87
Os06t0578100-00	Rice	nucleus	53.88	51.05
Zm00001d036068_P001	Maize	mitochondrion, plastid	33.44	38.29
Zm00001d036072_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	35.18	35.24
Zm00001d045456_P001	Maize	endoplasmic reticulum, plasma membrane	32.01	33.55
Zm00001d036066_P001	Maize	cytosol	34.07	32.33
Zm00001d035434_P001	Maize	cytosol	19.81	27.23
Zm00001d035428_P001	Maize	mitochondrion	28.84	27.12
Zm00001d008553_P001	Maize	cytosol	20.6	26.05
Zm00001d007190_P001	Maize	cytosol	20.13	25.35
Zm00001d024014_P001	Maize	cytosol	18.86	23.66
Zm00001d024886_P002	Maize	cytosol	19.18	23.45
Zm00001d032753_P001	Maize	cytosol	23.3	22.9
Zm00001d032750_P001	Maize	plastid	21.71	21.82
Zm00001d051773_P001	Maize	plasma membrane	15.53	21.35
Zm00001d027621_P001	Maize	cytosol	24.09	20.32
Zm00001d027622_P001	Maize	mitochondrion	22.19	20.23
Zm00001d051119_P001	Maize	nucleus	21.39	19.62
Zm00001d017247_P002	Maize	mitochondrion	21.55	19.54
Zm00001d025825_P001	Maize	mitochondrion	21.08	18.89
Zm00001d051977_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	21.87	18.88
Zm00001d018428_P001	Maize	mitochondrion	22.03	18.81
Zm00001d014084_P001	Maize	mitochondrion	20.76	18.63
Zm00001d024940_P001	Maize	peroxisome	16.48	14.11
Zm00001d004553_P001	Maize	peroxisome	16.32	13.73
Zm00001d020013_P001	Maize	cytosol	11.41	13.69
GSMUA_Achr4P06340_001	Banana	mitochondrion	0.63	2.08

Protein Annotations

EnsemblPlants:Zm00001d036069_P001	EnsemblPlants:Zm00001d036069_T001	EnsemblPlantsGene:Zm00001d036069	EntrezGene:103629444	Gene3D:3.40.50.410	InterPro:IPR002035
InterPro:IPR036465	InterPro:VWF_A	InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF57	PFAM:PF13768
PFscan:PS50234	ProteinID:AQK80245.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00327	SUPFAM:SSF53300
UniParc:UPI000221A494	UniProt:A0A1D6LKL1	MapMan:35.2	:	:	:

Description

Zinc finger (C3HC4-type RING finger) family protein

Coordinates

chr6:+:70204956..70207363

Molecular Weight (calculated)

68999.5 Da

IEP (calculated)

6.155

GRAVY (calculated)

-0.087

Length

631 amino acids

Sequence
(BLAST)

001: MEIFQLQLMI LPSLLTCFFS TLLLTQLMAA AGAEATVKVS TTPIFPEIPL GQARKDFQVL LRVEAPAAVV RPEARVPIDV VAVLDVSGSM NDPTAVPPER
101: RTTTSRLDLL RTAAKFMVDK LEDGDRLSIV AFSDRPVREL SSGLLYMTAD GRRNAIRSVD RLEARAGSGT ALVPAFEEAV NILDERVGDG RDRLGFIILL
201: TDGEGTTVSA LSERRREVIR RALGRYPVHA FGLGAAHDPE VLLHMAQESH GTYSFVDDDS IGDVAGALAV CLGGLSTIAA VETRVVLKAD ELNGVRIDRV
301: DAGGYDSSVS CGGTSCEVSV GNVLYAGEAK HFVVHLHVPA ALPSSSAKGG YYCDGLGACD RYYHHRHEQH LLAVDYSYRN HPSARAIEGE GHDVYVRRSP
401: AVLDGGRQAP APVPSPVVLQ HIVRSELLEV VAGVVQGELT INDRARAADV LQLRWEEFAA CHQFWGGGHD LMSGLEKEVG GMVSSLRAGV AAYAYAWVSS
501: HQMQRATSMG SAEKVTVEFL TPAMRLLLEE ARKLPRWWNW NPPHTGCVDH GFEMIDRRLE LWSKMKRDMQ NLGSFQEQSA AAVDDEQQRM AAVFQEASLE
601: AIDRAMHRDI YLAVVYASKQ RQCRHLVAAQ N

Best Arabidopsis Sequence Match ( AT3G54780.1 )
(BLAST)

001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.