Factsheet for Zm00001d035434_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035428_P001	Maize	mitochondrion	89.32	61.1
Zm00001d045454_P001	Maize	plasma membrane	29.85	21.08
Zm00001d036068_P001	Maize	mitochondrion, plastid	24.18	20.15
Zm00001d036069_P001	Maize	endoplasmic reticulum, extracellular, vacuole	27.23	19.81
Zm00001d036072_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	24.62	17.94
Zm00001d036066_P001	Maize	cytosol	24.18	16.69
Zm00001d045456_P001	Maize	endoplasmic reticulum, plasma membrane	21.79	16.61
Zm00001d024014_P001	Maize	cytosol	17.65	16.1
Zm00001d024886_P002	Maize	cytosol	17.86	15.89
Zm00001d008553_P001	Maize	cytosol	16.78	15.43
Zm00001d007190_P001	Maize	cytosol	16.78	15.37
Zm00001d051773_P001	Maize	plasma membrane	13.73	13.73
Zm00001d032750_P001	Maize	plastid	18.3	13.38
Zm00001d051119_P001	Maize	nucleus	18.52	12.35
Zm00001d032753_P001	Maize	cytosol	16.99	12.15
Zm00001d027622_P001	Maize	mitochondrion	18.08	11.99
Zm00001d014084_P001	Maize	mitochondrion	18.08	11.81
Zm00001d017247_P002	Maize	mitochondrion	17.86	11.78
Zm00001d027621_P001	Maize	cytosol	18.3	11.23
Zm00001d051977_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	17.86	11.22
Zm00001d018428_P001	Maize	mitochondrion	17.65	10.96
Zm00001d025825_P001	Maize	mitochondrion	15.25	9.94
Zm00001d024940_P001	Maize	peroxisome	11.11	6.92
Zm00001d004553_P001	Maize	peroxisome	11.11	6.8
Zm00001d020013_P001	Maize	cytosol	7.41	6.46
GSMUA_Achr4P06340_001	Banana	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d035434_P001	EnsemblPlants:Zm00001d035434_T001	EnsemblPlantsGene:Zm00001d035434	Gene3D:3.40.50.410	InterPro:IPR036465	InterPro:vWFA_dom_sf
PANTHER:PTHR10579	PANTHER:PTHR10579:SF57	ProteinID:AQK78976.1	SEG:seg	SUPFAM:SSF53300	UniParc:UPI000842A11A
UniProt:A0A1D6LGD2	MapMan:35.2	:	:	:	:

Description

Zinc finger (C3HC4-type RING finger) family protein

Coordinates

chr6:-:25350885..25352754

Molecular Weight (calculated)

50512.4 Da

IEP (calculated)

7.171

GRAVY (calculated)

-0.204

Length

459 amino acids

Sequence
(BLAST)

001: MYQILQLLDD RADKKRAGFI VLISDGLDGQ FKWGDESITP TDPIRGLLRK YPVHTFGLGK AHDPRALHYI ANISYGIYSS ITDNLENKII EAFAVCLAGF
101: KTVVAVDVCV DIRSSSLLIT KIDSGGYILR GSTGGILVGT LYAGEVKDFI VYFSYHTGSW SSGYHTTLNG IAASVTYKEA PGRQSTATDS CSVSLPIHVT
201: DTVYPPENPC PPYPMVLQQM VRLKVLDLLI SVLKEFLVLK GEAASAVHGK EGGDDPVLQA IAASLLQRKW KEFKQSDESW KEAPRNFVNL GGIDEDISAM
301: VGILKRGLGV GCIHSWLSSY QMQRATITGL PGSHMVATGQ FRTPAMNAMV QEAHRHLAKE ASAQDAGTSI VCKRAVELLD GVNKRFDLWC KLDHDLPRTN
401: QPSSHQEEGH ESRDITDVLH GNINRARQHD IYMAADHAIK QWRSFLTSVE KTHGHGPDK

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.