Factsheet for Zm00001d025825_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81931	Sorghum	mitochondrion	89.77	90.67
TraesCS2B01G382300.1	Wheat	mitochondrion	71.16	72.09
TraesCS2D01G361900.1	Wheat	mitochondrion	70.74	71.97
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	71.31	71.71
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	70.74	71.55
Os04t0508800-01	Rice	plasma membrane	71.02	70.62
Zm00001d017247_P002	Maize	mitochondrion	66.19	66.95
Zm00001d051119_P001	Maize	nucleus	64.06	65.55
GSMUA_Achr5P20480_001	Banana	mitochondrion	48.01	53.31
GSMUA_Achr11P...	Banana	mitochondrion	46.88	52.8
GSMUA_Achr1P03470_001	Banana	mitochondrion, plastid	46.73	51.41
VIT_13s0019g04440.t01	Wine grape	endoplasmic reticulum	50.14	49.72
VIT_06s0004g02630.t01	Wine grape	mitochondrion, nucleus	50.85	49.11
Bra005066.1-P	Field mustard	mitochondrion	45.6	48.93
GSMUA_Achr11P...	Banana	mitochondrion	37.22	48.7
PGSC0003DMT400059986	Potato	nucleus	50.14	48.56
CDX74871	Canola	mitochondrion	42.05	48.52
Solyc05g056140.2.1	Tomato	nucleus	49.86	48.21
CDY31517	Canola	extracellular, mitochondrion, plastid	40.91	48.16
Zm00001d051977_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	50.0	48.15
Zm00001d027622_P001	Maize	mitochondrion	47.3	48.12
CDX91506	Canola	mitochondrion	41.48	48.03
AT2G38970.1	Thale cress	mitochondrion	47.16	47.98
Zm00001d032750_P001	Maize	plastid	42.33	47.45
CDY52708	Canola	extracellular, mitochondrion, plastid	40.48	47.34
Zm00001d018428_P001	Maize	mitochondrion	49.57	47.23
AT5G60710.1	Thale cress	extracellular, mitochondrion, plastid	46.45	46.45
Bra020234.1-P	Field mustard	mitochondrion	45.45	46.04
PGSC0003DMT400020896	Potato	mitochondrion, plastid	47.87	45.98
Solyc11g069600.1.1	Tomato	plastid	47.59	45.7
CDY72156	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	34.8	45.45
Zm00001d014084_P001	Maize	mitochondrion	44.89	44.95
Bra002456.1-P	Field mustard	mitochondrion, plastid	44.6	44.86
CDY67781	Canola	cytosol	33.24	44.23
AT3G54780.4	Thale cress	endoplasmic reticulum, extracellular, plastid	42.61	43.99
CDY32819	Canola	cytosol	37.5	43.71
Bra030712.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	37.93	43.7
AT1G08050.1	Thale cress	plastid	39.77	43.68
Zm00001d032753_P001	Maize	cytosol	39.63	43.46
CDX93597	Canola	cytosol	37.5	41.06
CDX95099	Canola	cytosol	32.24	40.39
GSMUA_Achr2P11780_001	Banana	golgi	26.7	39.83
Zm00001d007190_P001	Maize	cytosol	26.99	37.92
Zm00001d008553_P001	Maize	cytosol	26.85	37.88
Zm00001d027621_P001	Maize	cytosol	37.93	35.7
Zm00001d024886_P002	Maize	cytosol	20.6	28.1
Zm00001d024014_P001	Maize	cytosol	19.32	27.04
Zm00001d051773_P001	Maize	plasma membrane	16.48	25.27
Zm00001d004553_P001	Maize	peroxisome	24.29	22.8
Zm00001d024940_P001	Maize	peroxisome	23.86	22.8
Zm00001d036068_P001	Maize	mitochondrion, plastid	17.47	22.32
Zm00001d020013_P001	Maize	cytosol	16.34	21.86
Zm00001d036069_P001	Maize	endoplasmic reticulum, extracellular, vacuole	18.89	21.08
Zm00001d045454_P001	Maize	plasma membrane	19.32	20.92
Zm00001d036072_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	17.9	20.0
Bra018663.1-P	Field mustard	nucleus	37.07	19.79
Zm00001d045456_P001	Maize	endoplasmic reticulum, plasma membrane	16.62	19.44
Zm00001d036066_P001	Maize	cytosol	16.9	17.89
Zm00001d035428_P001	Maize	mitochondrion	16.05	16.84
Zm00001d035434_P001	Maize	cytosol	9.94	15.25

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	ProteinID:AQK44723.1	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	UniProt:K7TUS1	PFAM:PF00092	PFAM:PF14624	PFAM:PF17123
PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF49	SMART:SM00184	SMART:SM00327
SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI0002219FFA	InterPro:VWF_A	InterPro:Vwaint_dom	EnsemblPlantsGene:Zm00001d025825
EnsemblPlants:Zm00001d025825_P001	EnsemblPlants:Zm00001d025825_T001	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf

Description

Putative RING zinc finger and VWF domain family protein

Coordinates

chr10:-:130921096..130929124

Molecular Weight (calculated)

76062.2 Da

IEP (calculated)

8.528

GRAVY (calculated)

-0.348

Length

704 amino acids

Sequence
(BLAST)

001: MEGAWRKVRQ ALGLRLCVHA PAAGGGNVQP AQSGAGGCRR DAAVAVAAPG ESGPNTPAGA IRRSKSGGKS SSLHSSKQEK CAICFASMRS GHGQALFTAE
101: CSHMFHFQCI SSNVKHGNYV CPVCRAKWKE IPYRSLSSTS PHGRIGGDHT RSPQQDPHLA LHQQVSNRRR EVRRLRTSEP ADYNDDEPLQ RMEAFDDLNF
201: GSSKTAEISS YPEFQAVPQS TCLDGFDILI HVKAPTSSSD DATGSLVNGS SLRLSRRVPI DIVTVLDVSG SMAGTKMALL KQAMGFVIQH LRPSDRLSVI
301: AFSSTARRLF PLQRMSHHGR QQALQAINSL GAGGGTNIAD ALKKAVKVIA DRSYKNSVCS IILLSDGQDT YNISSNFQGT SAGRRSLVPS ANPNELHMVP
401: LHTFGFGADH DSDTLHSISE ASGGTFSFIE DEGVMQDAFA QCIGGLLSVA VREMRLSMEC VDPGVLLCSI KSGSYPSKVA RDGRNGFVDI AHLYADEEKD
501: ILLSVTIPKS CEQTSLLRVA CAYKDPVSNE TIKIQGDEVK IKRPASTVSV PVSIEVDRER NRIRATNSME SAWAAAERGA LSEAVTILED CRRALSQCVA
601: SQNGDRLCMA LVAELREMQE RMANRQLYEA SGRAYMLSGL SSHSWQRATA RGDSTDSTTL VHSYQTPSMV QMLEHSQNFG SLPQGRRPQV QGAGSVLEKP
701: SKGR

Best Arabidopsis Sequence Match ( AT2G38970.1 )
(BLAST)

001: MGTRWRRMKL ALGLNLCTYL PRTLEESPTP LNSTERLSDV ALLSPLNWPM TPTPSSHGLK LSRNSSKSSK TCSICLNKMK EGGGHALFTA ECSHSFHFHC
101: IASNVKHGNQ VCPVCRAKWK EIPMQHPSFD LPYLFARSYN NDAAISLVHR LPRSRGVMNQ GRGLAPEPSM FDDDERLEQQ LVFSGKSYSD ALENNHPVRM
201: MDLKIYPEVS AVPRADSREK FDVLVHLRAA AMVTGNANSL NNQISRYPRA PVDLVTVLDI SGSMAGTKLA LLKRAMGFVI QNLGSNDRLS VIAFSSTARR
301: LFPLTKMSDA GRQRALQAVN SVVANGGTNI AEGLRKGVKV MEDRRDKNPV ASIILLSDGR DTYTMNQADP NYKLLLPLSM HGCESKRFQI PVHSFGFGSD
401: HDASLMHSVS ETSGGTFSFI ESESVIQDAL AQCIGGLLSV AVQELRLEIE GMCSDVHLSS IKAGSYQSLV SGDGRSGCVD IGDLYADEER DFLISVNIPP
501: QKDGNETPLL KMRCVYKDLL TKEIVTLQSH MLKIQRPETV GQEVVVSIEV DRQRNRFLAA EAMVKARALA EREDLAAGVT AIQNFRVALA ETVSAKSGDG
601: FCVALDRELK EMQERMASRH VYEVSGRAYI LSGLSSHSWQ RATSRGESGD GSSFVQAYYQ TPSMVEMLHR SQATSHHHRL IQPLFASQPK PR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:F4IU12]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.