Factsheet for Bra018663.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93597	Canola	cytosol	46.32	95.02
Bra030712.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	31.92	68.9
AT1G08050.1	Thale cress	plastid	33.06	68.02
Bra005066.1-P	Field mustard	mitochondrion	23.12	46.49
Bra020234.1-P	Field mustard	mitochondrion	23.81	45.18
Bra002456.1-P	Field mustard	mitochondrion, plastid	23.65	44.57
GSMUA_Achr5P20480_001	Banana	mitochondrion	21.38	44.48
GSMUA_Achr11P...	Banana	mitochondrion	21.0	44.32
VIT_06s0004g02630.t01	Wine grape	mitochondrion, nucleus	24.11	43.62
Solyc11g069600.1.1	Tomato	plastid	23.73	42.7
PGSC0003DMT400020896	Potato	mitochondrion, plastid	23.5	42.29
GSMUA_Achr1P03470_001	Banana	mitochondrion, plastid	20.32	41.88
GSMUA_Achr11P...	Banana	mitochondrion	16.91	41.45
Zm00001d017247_P002	Maize	mitochondrion	21.46	40.66
Zm00001d051119_P001	Maize	nucleus	21.15	40.55
OQU85324	Sorghum	mitochondrion	21.23	39.83
Os02t0619600-01	Rice	mitochondrion	21.3	39.63
TraesCS6D01G207700.2	Wheat	mitochondrion	21.15	39.3
TraesCS6B01G254400.1	Wheat	mitochondrion	21.15	39.3
TraesCS2B01G382300.1	Wheat	mitochondrion	20.7	39.28
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	21.15	39.19
TraesCS6A01G227300.1	Wheat	mitochondrion	21.08	39.1
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	20.55	38.94
TraesCS2D01G361900.1	Wheat	mitochondrion	20.24	38.58
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	20.47	38.57
OQU93256	Sorghum	mitochondrion	20.24	38.25
Os04t0508800-01	Rice	plasma membrane	20.39	37.99
TraesCS4B01G344100.1	Wheat	mitochondrion	20.32	37.91
Zm00001d027622_P001	Maize	mitochondrion	19.86	37.86
TraesCS4D01G339200.1	Wheat	mitochondrion	20.24	37.77
TraesCS5A01G512800.2	Wheat	mitochondrion	20.24	37.77
HORVU4Hr1G084340.1	Barley	mitochondrion	20.17	37.62
OQU81931	Sorghum	mitochondrion	19.86	37.59
Zm00001d025825_P001	Maize	mitochondrion	19.79	37.07
Os03t0142500-01	Rice	plasma membrane	19.33	36.74
GSMUA_Achr2P11780_001	Banana	golgi	12.28	34.32
Bra017859.1-P	Field mustard	plastid	11.68	24.37
Bra030218.1-P	Field mustard	nucleus	12.05	23.66
Bra040498.1-P	Field mustard	plastid	12.96	23.49
Bra024408.1-P	Field mustard	plastid	12.51	23.31
Bra031849.1-P	Field mustard	plastid	12.13	22.6
Bra024913.1-P	Field mustard	mitochondrion	8.42	21.26

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	EnsemblPlantsGene:Bra018663	EnsemblPlants:Bra018663.1	EnsemblPlants:Bra018663.1-P
InterPro:DUF707	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001841	InterPro:IPR002035
InterPro:IPR013083	InterPro:IPR036465	UniProt:M4DQ70	PFAM:PF00092	PFAM:PF05212	PFAM:PF14624
PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF97	SMART:SM00184
SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI000253EE46	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:

Description

AT2G28310 (E=4e-199) | unknown protein

Coordinates

chrA06:-:2726537..2737451

Molecular Weight (calculated)

146133.0 Da

IEP (calculated)

4.961

GRAVY (calculated)

-0.356

Length

1319 amino acids

Sequence
(BLAST)

0001: MENPNETLNL PKIQDPSSTD DASRSSVDST QPDPSAPLLP PSSSSKNECA ICLDEIVKGD GKAIFTAECS HTFHFDCITT NVKHGNKICP LCRTQWKQVP
0101: SFLDNTRPPS RFHIPLPVPP LPSPAPQISF EDDEPLPQAQ AQAQAQAQAH GDQPGPPPLE VKLLPQVSAV AKEVTLGDFA VLVHLKAGDV SGDEEMPSRA
0201: PLDLVAVLDV SSSMDGPKME LLKNAVGFVI QNLGETDRLS VVAFSSDARR LFPLKVMSAA GKREAVQAVN SLVADGCTNI AEGLKIGARV IEDRRCRSPV
0301: PVMMLLSDGQ DNFTFSQFGF GVRRRTSYES LLPSSTSSIP IHAFGFGSDH DAELMHAISR VSSGTFSFIE TETVIRDAFA QCIGGLLSVV VLEQVVEIEC
0401: VHEVGVKICS VKAGSYRNSV SSDGRSATIS VGDMYAEEER DFLVVLEIPS CEESESMSLL KVRCVYKDPV TRETVRVESG ELTIQRPNEL TGEEVVSIEV
0501: DRQRNRFLVS QAISEAKALA DGGDVRAAGE LLRKSERDLA ETLSARSGDG LCESLTFELR ALQEKMTSMS MYQTSGRAYA LSSMSSHSAQ RATARYSPTV
0601: SGFSPTYSPG TAGYSMPLPQ AYQTSAMARM LAGAARGIPM VDPASSEVQE ERVLPPKVPV TPQKDWVQQV EEVEDGEIVA LAIGVTDTVE ARSDILVENT
0701: EEAIIPSVDN TENLGVVETE DTLILEKSVE EKVDLEKTTN AEGDEWMDVS PGKASRSPRK TLDIEEISIL SNSRFSVLSP TEDVEDEEVD PMDVPARDTE
0801: QATNVKSVVS QKPEKEKEVI TRQSLPRSSK DNHKYLTDTK LARSFTKVEI RSGVSTSFWF DDWSPLGRIF DITGAGGCVA LGIGLNATVE YVVQHYRSRR
0901: HRSEHLIAID IEIRKLRTQG LLDEDDVKLW RVPMGIFHRS GAPRRTNENA KLIITTIVAM VFGFFIGITL PSVSFTKINL PSGFISSLDG GRSPEDFGSR
1001: HFPKIYVPTN PHGAELLPPG IIVAESDFYL RRLWGEPSED LKKKPKYLVT FTVGFEQRNN INAAVKKFSE DFQILLFHYD GRTTEWDQFE WSKNAIHISA
1101: KKQTKWWYAK RFLHPDVVSA YEYIFIWDED LGVEHFNAER YIELVKKHGL EISQPGLEPN NGLTWEMTKR RGDRDVHKET QEKPGWCSDP HLPPCAAFVE
1201: IMAPVFSREA WRCVWHMIQN DLVHGWGLDF ALRRCVEPAH EKIGVVDSQW IIHQVIPSLG SQGESEKGKT PWQGVRERCR NEWTLFQNRV AEADKEYMEQ
1301: QKGNAQKSGM SEPSPGSSI

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.