CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025825_P001	Maize	mitochondrion	90.67	89.77
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	73.03	73.13
TraesCS2D01G361900.1	Wheat	mitochondrion	72.6	73.12
TraesCS2B01G382300.1	Wheat	mitochondrion	72.88	73.09
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	72.74	72.43
Os04t0508800-01	Rice	plasma membrane	72.45	71.33
OQU85324	Sorghum	mitochondrion	67.14	66.57
GSMUA_Achr5P20480_001	Banana	mitochondrion	49.21	54.1
GSMUA_Achr11P...	Banana	mitochondrion	47.2	52.64
GSMUA_Achr1P03470_001	Banana	mitochondrion, plastid	47.92	52.19
VIT_13s0019g04440.t01	Wine grape	endoplasmic reticulum	51.08	50.14
PGSC0003DMT400059986	Potato	nucleus	51.94	49.79
Solyc05g056140.2.1	Tomato	nucleus	51.65	49.45
VIT_06s0004g02630.t01	Wine grape	mitochondrion, nucleus	51.65	49.38
Bra005066.1-P	Field mustard	mitochondrion	46.05	48.93
CDY31517	Canola	extracellular, mitochondrion, plastid	41.89	48.83
OQU93256	Sorghum	mitochondrion	48.78	48.71
CDX74871	Canola	mitochondrion	42.47	48.52
GSMUA_Achr11P...	Banana	mitochondrion	37.3	48.33
CDY52708	Canola	extracellular, mitochondrion, plastid	41.61	48.17
AT2G38970.1	Thale cress	mitochondrion	47.78	48.12
CDX91506	Canola	mitochondrion	41.75	47.86
AT5G60710.1	Thale cress	extracellular, mitochondrion, plastid	47.92	47.44
Bra020234.1-P	Field mustard	mitochondrion	46.63	46.76
OQU85917	Sorghum	nucleus	49.35	46.68
PGSC0003DMT400020896	Potato	mitochondrion, plastid	48.21	45.84
Bra002456.1-P	Field mustard	mitochondrion, plastid	45.77	45.57
Solyc11g069600.1.1	Tomato	plastid	47.92	45.57
CDY72156	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	35.01	45.27
EER91513	Sorghum	mitochondrion	45.62	45.17
CDY67781	Canola	cytosol	33.86	44.61
CDY32819	Canola	cytosol	37.88	43.71
AT3G54780.4	Thale cress	endoplasmic reticulum, extracellular, plastid	42.75	43.7
AT1G08050.1	Thale cress	plastid	40.03	43.53
Bra030712.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	37.88	43.21
EER91508	Sorghum	cytosol, plastid	40.03	43.12
CDX93597	Canola	cytosol	38.02	41.21
EER95529	Sorghum	nucleus	37.88	40.62
EER91509	Sorghum	nucleus	33.72	40.24
CDX95099	Canola	cytosol	32.28	40.04
GSMUA_Achr2P11780_001	Banana	golgi	26.83	39.62
OQU93258	Sorghum	cytosol	38.59	38.32
OQU91675	Sorghum	cytosol	33.57	37.62
OQU79988	Sorghum	cytosol	28.69	36.97
OQU90497	Sorghum	cytosol	27.12	36.7
EES11757	Sorghum	cytosol	21.09	28.32
EES05180	Sorghum	mitochondrion	12.91	24.39
KXG38506	Sorghum	cytosol	11.33	23.37
KXG20893	Sorghum	cytosol, plastid	19.51	22.26
EES10354	Sorghum	plastid	14.92	21.85
OQU89212	Sorghum	cytosol	17.5	21.82
EER87790	Sorghum	endoplasmic reticulum, extracellular	19.51	21.38
KXG25767	Sorghum	mitochondrion	13.77	20.51
Bra018663.1-P	Field mustard	nucleus	37.59	19.86
OQU81040	Sorghum	peroxisome	20.37	19.86
OQU75754	Sorghum	mitochondrion, plastid	16.93	19.06

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	EntrezGene:8075916	UniProt:A0A1Z5REJ8	InterPro:IPR001841
InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	EnsemblPlants:OQU81931	ProteinID:OQU81931	ProteinID:OQU81931.1
PFAM:PF00092	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579
PANTHER:PTHR10579:SF49	SMART:SM00184	SMART:SM00327	EnsemblPlantsGene:SORBI_3006G142332	SUPFAM:SSF53300	SUPFAM:SSF57850
UniParc:UPI0001A87714	InterPro:VWF_A	InterPro:Vwaint_dom	RefSeq:XP_002448147.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	InterPro:vWFA_dom_sf	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:50436657..50441595

Molecular Weight (calculated)

75410.2 Da

IEP (calculated)

8.492

GRAVY (calculated)

-0.363

Length

697 amino acids

Sequence
(BLAST)

001: MESAWRKVRK ALGLRLGVHA SAAGGGINVR RAPSGAGGCR RDAAVAVAAA AAAGESGPSM PVGALRPSKS GRRSSSSHSS KQGKCAICFA SMRSGHGQAL
101: FTAECSHMFH FQCISSNVKH GNYVCPVCRA KWKEIPYRSL SSTSPHGRVG SEHNRSPQQD PHLPLHRQVS NRRREVRRLH TSEPADYNDD EPLQHIEAFE
201: NLNSGSNKTA EISSYPESQA VSQSSCLDGF DILIHVKAPT SSSNDVTGSL VNESSMRSSR RVPIDLVTVL DVSGSMAGTK LALLKQAMGF VIQHLRPSDR
301: LSVIAFSSTA RRLFPLQRMS HHGRQQALQA ISSLGAGGGT NIADALKKAV KVIEDRNYKN SVCSIILLSD GQDTFNISSN FQGTSAGRRS LVPPSILNEL
401: HMVPLHTFGF GADHDSDTLH SISEASGGTF SFIEDEGVMQ DAFAQCIGGL LSVAVQEMRL SMECVDPGVQ LCSIKCGSYP SKVARDGRNG SVDIAHLYAD
501: EEKDILLSVT IPKSCEQTSL LRVACAYKDS VTNETIKIQG DEVKIKRPTS TVSVPVSIEV DRERNRIRAA NSMESAWAAA ERGALSEAVT ILEDCRRALS
601: ESVASQNGDR LCMALDAELR EMQERMANRQ LYEASGRAYM LSGLSSHSWQ RATARGDSTD STTLVHSYQT PSMVQMLEHS QNFSSLPQGR RPQVQGR

Best Arabidopsis Sequence Match ( AT2G38970.1 )
(BLAST)

001: MGTRWRRMKL ALGLNLCTYL PRTLEESPTP LNSTERLSDV ALLSPLNWPM TPTPSSHGLK LSRNSSKSSK TCSICLNKMK EGGGHALFTA ECSHSFHFHC
101: IASNVKHGNQ VCPVCRAKWK EIPMQHPSFD LPYLFARSYN NDAAISLVHR LPRSRGVMNQ GRGLAPEPSM FDDDERLEQQ LVFSGKSYSD ALENNHPVRM
201: MDLKIYPEVS AVPRADSREK FDVLVHLRAA AMVTGNANSL NNQISRYPRA PVDLVTVLDI SGSMAGTKLA LLKRAMGFVI QNLGSNDRLS VIAFSSTARR
301: LFPLTKMSDA GRQRALQAVN SVVANGGTNI AEGLRKGVKV MEDRRDKNPV ASIILLSDGR DTYTMNQADP NYKLLLPLSM HGCESKRFQI PVHSFGFGSD
401: HDASLMHSVS ETSGGTFSFI ESESVIQDAL AQCIGGLLSV AVQELRLEIE GMCSDVHLSS IKAGSYQSLV SGDGRSGCVD IGDLYADEER DFLISVNIPP
501: QKDGNETPLL KMRCVYKDLL TKEIVTLQSH MLKIQRPETV GQEVVVSIEV DRQRNRFLAA EAMVKARALA EREDLAAGVT AIQNFRVALA ETVSAKSGDG
601: FCVALDRELK EMQERMASRH VYEVSGRAYI LSGLSSHSWQ RATSRGESGD GSSFVQAYYQ TPSMVEMLHR SQATSHHHRL IQPLFASQPK PR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:F4IU12]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.