CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95099	Canola	cytosol	80.09	91.64
CDY72156	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	60.96	72.73
CDY67781	Canola	cytosol	59.25	72.02
CDY32819	Canola	cytosol	66.56	70.86
AT1G08050.1	Thale cress	plastid	69.67	69.89
CDY31517	Canola	extracellular, mitochondrion, plastid	44.79	48.16
CDY52708	Canola	extracellular, mitochondrion, plastid	44.32	47.34
Bra018663.1-P	Field mustard	nucleus	95.02	46.32
CDX74871	Canola	mitochondrion	43.39	45.74
CDX91506	Canola	mitochondrion	43.23	45.72
GSMUA_Achr11P...	Banana	mitochondrion	43.7	44.96
GSMUA_Achr5P20480_001	Banana	mitochondrion	44.01	44.64
VIT_06s0004g02630.t01	Wine grape	mitochondrion, nucleus	50.23	44.31
Solyc11g069600.1.1	Tomato	plastid	49.3	43.25
GSMUA_Achr1P03470_001	Banana	mitochondrion, plastid	42.77	42.97
PGSC0003DMT400020896	Potato	mitochondrion, plastid	48.83	42.84
GSMUA_Achr11P...	Banana	mitochondrion	34.99	41.82
Zm00001d017247_P002	Maize	mitochondrion	44.48	41.09
Zm00001d051119_P001	Maize	nucleus	43.7	40.84
Os02t0619600-01	Rice	mitochondrion	44.32	40.2
OQU85324	Sorghum	mitochondrion	43.86	40.11
TraesCS6D01G207700.2	Wheat	mitochondrion	44.01	39.86
TraesCS6B01G254400.1	Wheat	mitochondrion	44.01	39.86
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	44.01	39.75
TraesCS6A01G227300.1	Wheat	mitochondrion	43.86	39.66
TraesCS2B01G382300.1	Wheat	mitochondrion	42.61	39.42
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	42.3	39.08
TraesCS2D01G361900.1	Wheat	mitochondrion	41.68	38.73
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	42.15	38.71
OQU93256	Sorghum	mitochondrion	41.84	38.54
Zm00001d027622_P001	Maize	mitochondrion	41.37	38.44
TraesCS4B01G344100.1	Wheat	mitochondrion	42.15	38.33
Os04t0508800-01	Rice	plasma membrane	42.15	38.28
TraesCS5A01G512800.2	Wheat	mitochondrion	41.99	38.19
TraesCS4D01G339200.1	Wheat	mitochondrion	41.99	38.19
HORVU4Hr1G084340.1	Barley	mitochondrion	41.84	38.05
OQU81931	Sorghum	mitochondrion	41.21	38.02
Zm00001d025825_P001	Maize	mitochondrion	41.06	37.5
Os03t0142500-01	Rice	plasma membrane	40.44	37.46
GSMUA_Achr2P11780_001	Banana	golgi	24.73	33.69
CDY28148	Canola	plastid	25.51	24.15
CDY25618	Canola	nucleus, peroxisome, plastid	24.11	23.41
CDX72660	Canola	cytosol, nucleus, peroxisome, plastid	24.73	23.21
CDY45010	Canola	mitochondrion, peroxisome	25.82	22.8
CDY08765	Canola	plastid	25.04	22.74
CDY31616	Canola	nucleus	24.26	22.71
CDX89500	Canola	cytosol, peroxisome, plastid	23.64	22.59
CDY45614	Canola	plastid	24.57	22.19
CDY37838	Canola	plastid	17.11	22.0
CDY52535	Canola	plastid	23.79	21.55
CDY17702	Canola	mitochondrion	12.6	21.04
CDX77800	Canola	nucleus	17.42	19.72
CDX93598	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	2.95	4.92

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	GO:A0A078DXI2	EnsemblPlants:CDX93597	ProteinID:CDX93597
ProteinID:CDX93597.1	EnsemblPlantsGene:GSBRNA2T00156277001	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465
PFAM:PF00092	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579
PANTHER:PTHR10579:SF97	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI0004EE01D1
InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf

Description

BnaA06g04510D

Coordinates

chrLK031876:+:881097..883145

Molecular Weight (calculated)

69372.2 Da

IEP (calculated)

4.778

GRAVY (calculated)

-0.200

Length

643 amino acids

Sequence
(BLAST)

001: MENPNESLNL PTIQDPSSTD DASRSSVDST RPDPSAPLLP PSSSSKNECA ICLDEIVKGD GKAIFTAECS HTFHFDCITT NVKHGNKICP LCRTQWKQVP
101: SFLDNTRPPS RFHIPLPVPP LPSPAPQISF EDDEPLPQAQ AQAQAQAQAH GDQPGPPPLE VKLLPQVSAV AKEVTLGDFA VLVHLKAGDV SGDEEMPSRA
201: PLDLVAVLDV SSSMDGPKME LLKNAVGFVI QNLGETDRLS VVAFSSDARR LFPLKVMSAA GKREAVQAVN SLVADGCTNI AEGLKIGARV IEDRRCTSPV
301: PVMMLLSDGQ DNFTFSQFGF GVRRRTSYES LLPSSTSSIP IHAFGFGSDH DAELMHAISR VSSGTFSFIE TETVIRDAFA QCIGGLLSVV VLEQVVEIEC
401: VHEVGVKICS VKAGSYRNSV SSDGRSATIS VGDMYAEEER DFLVVLEIPS CEESESMSLL KVRCVYKDPV TRETVRVESG ELIIQRPNEL TGEEVVSIEV
501: DRQRNRFLVS QAISEAKALA DGGDVRAAGE LLRKSERDLA ETLSARSGDG LCESLTFELR ALQEKMTSMS MYQTSGRAYA LSSMSSHSAQ RATARYSPTV
601: SGFSPVMPLP QAYQTSAMAR MVTRSQQLGI QSPTTSPAPG DQT

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.