CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040498.1-P	Field mustard	plastid	99.71	92.99
CDY45010	Canola	mitochondrion, peroxisome	96.91	90.38
AT5G49665.1	Thale cress	plastid	83.51	76.62
VIT_18s0001g08100.t01	Wine grape	plastid	58.47	52.44
Solyc04g076860.2.1	Tomato	nucleus	56.41	51.07
PGSC0003DMT400016355	Potato	nucleus	55.96	50.4
KRH72527	Soybean	nucleus	48.16	50.23
KRH16916	Soybean	nucleus	49.34	49.7
CDY25618	Canola	nucleus, peroxisome, plastid	41.38	42.45
CDX89500	Canola	cytosol, peroxisome, plastid	40.65	41.01
Os04t0101800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	41.09	40.49
GSMUA_Achr5P14740_001	Banana	mitochondrion	40.8	40.03
CDX72660	Canola	cytosol, nucleus, peroxisome, plastid	40.35	40.0
CDY31616	Canola	nucleus	40.21	39.74
GSMUA_Achr4P22090_001	Banana	nucleus	41.09	39.02
Zm00001d024940_P001	Maize	peroxisome	42.27	38.94
GSMUA_Achr7P01890_001	Banana	mitochondrion	40.8	38.8
Zm00001d004553_P001	Maize	peroxisome	42.56	38.53
GSMUA_Achr4P20870_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	41.24	38.25
TraesCS2A01G045100.1	Wheat	peroxisome	42.12	37.63
TraesCS2D01G043700.1	Wheat	peroxisome	41.97	37.35
TraesCS2B01G057300.1	Wheat	peroxisome	42.12	37.14
CDY52535	Canola	plastid	38.44	36.76
OQU81040	Sorghum	peroxisome	38.29	36.36
CDY08765	Canola	plastid	37.7	36.16
CDY45614	Canola	plastid	37.41	35.67
CDY37838	Canola	plastid	24.59	33.4
CDY72156	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	24.01	30.24
CDY67781	Canola	cytosol	23.12	29.68
CDY31517	Canola	extracellular, mitochondrion, plastid	25.92	29.43
CDY52708	Canola	extracellular, mitochondrion, plastid	25.48	28.74
CDY32819	Canola	cytosol	23.86	26.82
CDX74871	Canola	mitochondrion	23.27	25.9
CDX91506	Canola	mitochondrion	23.12	25.82
CDX93597	Canola	cytosol	24.15	25.51
CDX95099	Canola	cytosol	20.91	25.27
CDY17702	Canola	mitochondrion	13.11	23.12
CDX77800	Canola	nucleus	16.79	20.07
CDX93598	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	0.29	0.52

Protein Annotations

MapMan:26.3.1.6	Gene3D:3.30.40.10	Gene3D:3.40.50.410	GO:A0A078GU25	UniProt:A0A078GU25	EnsemblPlants:CDY28148
ProteinID:CDY28148	ProteinID:CDY28148.1	EnsemblPlantsGene:GSBRNA2T00039789001	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	PFAM:PF13519	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579
PANTHER:PTHR10579:SF55	SMART:SM00184	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI0004EEA7C5	InterPro:VWF_A
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

BnaAnng03250DBnaAnng03250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU25]

Coordinates

chrLK032215:+:49237..51587

Molecular Weight (calculated)

73943.4 Da

IEP (calculated)

8.737

GRAVY (calculated)

-0.275

Length

679 amino acids

Sequence
(BLAST)

001: MGTGWRRAFC TTASRKSDAV APDLDKQQAG YTLNSNPSPR SCVKLAFLSG GSNSSTPRTN YSPSLGCRTT DAENPVPTAE QIPTPRSATK SPRLSLKARS
101: NPSSPRLKLS LFRNSFKFRS NCGICLNSVK TGQGTAKYTA ECSHVFHFPC VTDYVSKHGK LVCPVCNSLW KDASLLTLHG NGIEPPLENA SHNYDDDEPL
201: LSPRFVTIPE ANENCRCEEE TDVAQFKGFI PATGRDFGNV QVSLLPESAV VSVGCGYETR AVALRVKAPP PLGTRGRRLL DPSQRAPVDL VVVVDVGGTM
301: NGAKLQMVKR AMRVVISSLS SADRLSIVSA SSKRLLPLKR MTENGKRSAG VVVDGLLCCQ SSKISDGLEK AARVLEDRRE RNPIASIVLL KDGQPISSRA
401: NTNQRSTITH VGLTRFAHIE IPVTEYGFGE SGGCSHAPVE EAFAKCLGGF LSVVVQDLRI QFRVGSGSGP CEIAAIYLCN GQPTLVSSGS GSVRLGDLYA
501: GEEREVLMEL RIPSTASMVH QVLSVRGLYK DPSTQEVVYG RDQSLRVPQA VRSSSPSIER LRCLFIMTRA VAESRRLVEY GECTSAHHLL TSAHALLGQS
601: RMAEAADYTK VVEAELVEVQ WRRQQLMEYE RSERDTTMIL VDENGEPLTP ASAWRAAEKF AKVAMMKKSD LHGFENARF

Best Arabidopsis Sequence Match ( AT5G49665.1 )
(BLAST)

001: MGTGWRRAFC TTAPRNSDAA APDLDKQRTG YNLTPSPSPR SCVKLAFLSG GSNPSTPRST SSPSLRCRTA DAQTPTAEQT STPRSATKSP RLSLAAISNP
101: SSPRSPLKLS LFRNSFKFRS TCGICLNSVK TGQGTAKYTA ECSHAFHFPC IADYVRKQGK LVCPVCNSIW KDASLLVPHK NATESPLDDS VSVIQEKRVV
201: VTSSPRAKPR PKQSDYSRFY DDDEPLLSPR FVTIPEADEN CGGEEEDDVP QFKGFVVDPN PSFAVKTNEI PVNGRDFGNV QVSLLPEAAV VSVGCGYETR
301: AVALRVKAPP PLTARGGVGR RLLDPSQRAP VDLVVVVDVG GTMNGAKLQM VKRAMRLVIS SLGSADRLSI VAVVMTVPKR LLPLKRMTEH GKRSAGAVVD
401: GLLCGQGSNT SEALKKASRV LEDRRERNPV ASIVLLTDGQ GQLSKVHTNQ RSTITNVGST RFAHIEIPVT EHGFGESGGC SNAPAEEAFA KCIGGLLSVV
501: VQDLRIQIRV GSGSGPCEIS AIYLCNGRPT LVSSGSGSVR LGDLYAGEER ELLVELRVPS TATRAYQILS VRGLFKDPST QEVVYGRDQS LRVPQAVRSS
601: SSPRIERLRS LFIATRAVAE SRRLVEYGEC TSAYHLLTSA RALLGQSGTV EAAEYIKVVE AELVEVQWRG QQLMEYQSQH QQQHNQRRRG SERETTTTMT
701: LMDENGEPLT PASAWRAAEK LAKLAMMKKS DLHGFENARF

Arabidopsis Description

WAV3E3 ubiquitin-protein ligase WAV3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.