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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • peroxisome 1
  • plastid 1
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, peroxisome
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr1P00560_001
GSMUA_Achr1P01610_001
GSMUA_Achr1P03730_001
GSMUA_Achr2P06030_001
GSMUA_Achr2P11860_001
GSMUA_Achr2P12040_001
GSMUA_Achr2P17520_001
GSMUA_Achr2P18250_001
GSMUA_Achr3P09860_001
GSMUA_Achr3P22500_001
GSMUA_Achr4P21110_001
GSMUA_Achr4P21690_001
GSMUA_Achr4P26960_001
GSMUA_Achr4P26970_001
GSMUA_Achr4P28510_001
GSMUA_Achr4P30100_001
GSMUA_Achr5P10290_001
GSMUA_Achr5P10300_001
GSMUA_Achr5P13770_001
GSMUA_Achr5P26130_001
GSMUA_Achr6P06410_001
GSMUA_Achr6P08880_001
GSMUA_Achr6P19560_001
GSMUA_Achr6P20920_001
GSMUA_Achr7P03170_001
GSMUA_Achr7P16760_001
GSMUA_Achr7P22470_001
GSMUA_Achr7P26720_001
GSMUA_Achr8P02810_001
GSMUA_Achr8P07910_001
GSMUA_Achr8P14860_001
GSMUA_Achr8P21300_001
GSMUA_Achr8P28400_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65683.1 GSMUA_Achr3P22500_001 AT1G01050.1 21798944
AT5G65683.1 GSMUA_Achr5P26130_001 AT1G01050.1 21798944
AT5G65683.1 GSMUA_Achr6P19560_001 AT1G01050.1 21798944
AT5G65683.1 GSMUA_Achr7P03170_001 AT1G01050.1 21798944
AT5G65683.1 GSMUA_Achr8P07910_001 AT1G01050.1 21798944
AT5G65683.1 GSMUA_Achr1P03730_001 AT1G01510.1 21798944
AT5G65683.1 GSMUA_Achr2P11860_001 AT1G01510.1 21798944
AT5G65683.1 GSMUA_Achr5P10290_001 AT1G01510.1 21798944
AT5G65683.1 GSMUA_Achr5P10300_001 AT1G01510.1 21798944
AT5G65683.1 GSMUA_Achr5P13770_001 AT1G01510.1 21798944
AT5G65683.1 GSMUA_Achr1P01610_001 AT2G44950.1 21798944
AT5G65683.1 GSMUA_Achr4P26960_001 AT2G44950.1 21798944
AT5G65683.1 GSMUA_Achr4P26970_001 AT2G44950.1 21798944
AT5G65683.1 GSMUA_Achr2P17520_001 AT3G22960.1 21798944
AT5G65683.1 GSMUA_Achr4P21110_001 AT3G22960.1 21798944
AT5G65683.1 GSMUA_Achr4P28510_001 AT3G22960.1 21798944
AT5G65683.1 GSMUA_Achr7P16760_001 AT3G22960.1 21798944
AT5G65683.1 GSMUA_Achr2P06030_001 AT3G24140.1 21798944
AT5G65683.1 GSMUA_Achr8P28400_001 AT3G24140.1 21798944
AT5G65683.1 GSMUA_Achr6P06410_001 AT3G48550.1 21798944
AT5G65683.1 GSMUA_Achr6P20920_001 AT3G48550.1 21798944
AT5G65683.1 GSMUA_Achr6P08880_001 AT3G54170.1 21798944
AT5G65683.1 GSMUA_Achr3P09860_001 AT3G56270.1 21798944
AT5G65683.1 GSMUA_Achr8P02810_001 AT3G56270.1 21798944
AT5G65683.1 GSMUA_Achr8P21300_001 AT3G56270.1 21798944
AT5G65683.1 GSMUA_Achr7P26720_001 AT4G17220.1 21798944
AT5G65683.1 GSMUA_Achr1P00560_001 AT4G17680.1 21798944
AT5G65683.1 GSMUA_Achr2P12040_001 AT4G17680.1 21798944
AT5G65683.1 GSMUA_Achr2P18250_001 AT4G17680.1 21798944
AT5G65683.1 GSMUA_Achr4P21690_001 AT4G17680.1 21798944
AT5G65683.1 GSMUA_Achr4P30100_001 AT4G17680.1 21798944
AT5G65683.1 GSMUA_Achr8P14860_001 AT4G17680.1 21798944
AT5G65683.1 GSMUA_Achr7P22470_001 AT5G43280.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P14740_001 Banana mitochondrion 65.57 69.36
GSMUA_Achr4P22090_001 Banana nucleus 65.71 67.27
GSMUA_Achr7P01890_001 Banana mitochondrion 64.89 66.53
Zm00001d024940_P001 Maize peroxisome 52.19 51.83
Os04t0101800-01 Rice cytosol, mitochondrion, peroxisome, plastid 48.77 51.81
Zm00001d004553_P001 Maize peroxisome 52.19 50.93
TraesCS2A01G045100.1 Wheat peroxisome 52.87 50.92
VIT_07s0205g00030.t01 Wine grape nucleus 45.49 50.76
TraesCS2D01G043700.1 Wheat peroxisome 52.6 50.46
TraesCS2B01G057300.1 Wheat peroxisome 53.01 50.39
OQU81040 Sorghum peroxisome 46.86 47.97
VIT_18s0001g08100.t01 Wine grape plastid 46.17 44.65
PGSC0003DMT400078676 Potato plastid 43.03 44.3
Solyc02g091710.2.1 Tomato plastid 43.44 44.29
KRH74431 Soybean mitochondrion 40.98 44.12
KRH39527 Soybean extracellular, golgi 32.1 43.44
Solyc04g076860.2.1 Tomato nucleus 44.26 43.2
KRH45468 Soybean cytosol, peroxisome 23.36 42.43
PGSC0003DMT400016355 Potato nucleus 43.17 41.91
CDY28148 Canola plastid 38.25 41.24
KRH72527 Soybean nucleus 36.34 40.86
AT5G49665.1 Thale cress plastid 41.12 40.68
KRH16916 Soybean nucleus 37.43 40.65
CDY25618 Canola nucleus, peroxisome, plastid 35.66 39.43
Bra040498.1-P Field mustard plastid 39.21 39.42
Bra030218.1-P Field mustard nucleus 36.07 39.29
AT2G22680.1 Thale cress cytosol, peroxisome, plastid 36.48 39.09
CDY45010 Canola mitochondrion, peroxisome 38.8 39.01
KRH75634 Soybean nucleus 33.88 38.27
CDX89500 Canola cytosol, peroxisome, plastid 34.97 38.04
CDX72660 Canola cytosol, nucleus, peroxisome, plastid 35.52 37.96
CDY31616 Canola nucleus 35.38 37.7
Bra017859.1-P Field mustard plastid 32.51 37.66
CDY08765 Canola plastid 36.2 37.43
Bra024408.1-P Field mustard plastid 36.07 37.29
CDY52535 Canola plastid 35.93 37.04
Bra031849.1-P Field mustard plastid 35.79 37.01
CDY45614 Canola plastid 35.11 36.1
AT5G65683.1 Thale cress peroxisome, plastid 34.7 35.43
AT4G37890.1 Thale cress nucleus 34.97 34.64
KRH45469 Soybean nucleus 7.79 32.2
CDY37838 Canola plastid 21.86 32.0
GSMUA_Achr5P20480_001 Banana mitochondrion 22.13 25.55
GSMUA_Achr11P... Banana mitochondrion 20.22 23.68
GSMUA_Achr1P03470_001 Banana mitochondrion, plastid 20.36 23.28
GSMUA_Achr9P22360_001 Banana plastid 12.84 23.21
GSMUA_Achr11P... Banana mitochondrion 16.8 22.86
GSMUA_Achr6P36520_001 Banana plastid 21.58 22.6
GSMUA_Achr4P06340_001 Banana mitochondrion 5.46 20.83
GSMUA_Achr2P11780_001 Banana golgi 13.25 20.55
Protein Annotations
MapMan:26.3.1.6Gene3D:3.30.40.10Gene3D:3.40.50.410ncoils:CoilEnsemblPlantsGene:GSMUA_Achr4G20870_001EnsemblPlants:GSMUA_Achr4P20870_001
EnsemblPlants:GSMUA_Achr4T20870_001InterPro:IPR001841InterPro:IPR002035InterPro:IPR013083InterPro:IPR036465UniProt:M0SQQ0
PFAM:PF13519PFAM:PF13639PFscan:PS50089PFscan:PS50234PANTHER:PTHR10579PANTHER:PTHR10579:SF55
SMART:SM00184SMART:SM00327SUPFAM:SSF53300SUPFAM:SSF57850UniParc:UPI00029619E8InterPro:VWF_A
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:segInterPro:vWFA_dom_sf::
Description
zinc finger family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G20870_001]
Coordinates
chr4:+:21420984..21423896
Molecular Weight (calculated)
79716.4 Da
IEP (calculated)
10.587
GRAVY (calculated)
-0.385
Length
732 amino acids
Sequence
(BLAST)
001: MGTGGWRRAF CTSVGVDPDT TVATRREAGE RQQLSPSTRS CAKLIFFSGG GRGGSNPSTP RLDEGLRCRT RAMSPDRPKL QCETPVGVTP TLSIGTPNPR
101: SRTPALFRRK AFSAPSSPRS PSRFGLFKHR SSGRCQLCWQ RLKRSQETPV FTAECSHAFH FPCIAAHVRN HSSLACPVCS ATWRQAQLFS ALHSREKDAV
201: LEHGPAGELA AAAAAVKVYD DDEPLLAAYK TNQGGGVRFN PIPEAANEDE DDDDQGVPRR LTPKLKAVAL QVSVIPQAAL LSEGRKHRNY VVAVKVKAPS
301: IASARLLDTA SGRAPIDLVM VLDVGQGMMA EKLQMLKRSI RLVVSSLGPV DRLSVVAFSA AAGAKRLIPL RRMSRQGQRA ARQIVDRLAV VGRDAPGRGA
401: NVGDALRKAA KVLEDRRERN PVATVMLLSD SGQQQLLLRD HGKKDDNHHK PLYAPRDSGG DIHPHPPSTP SLQKRRQVPN EDAFIKCVGG LLSVVMRDVR
501: LQLIFPTGDI SAVYPCSGRS CGEVALRGGS SVLRLGDLYA EEERELLVEL RVPVSSSAAA GPQNGHHQLV VKCNYRDPAT QELTLDAEQI LLLPPELSRA
601: ASSSACSATP MRLRNLFVST RAVAESRRLA DLSDSATAHH LFSSARSLLL QSASDAQDHR LIQNPDEELA DLQRRRRRLR RQREVAAGAE VRGESITPTS
701: AWRAAEQLAK VAIIRKSLNR VSDLHGFENA RF
Best Arabidopsis Sequence Match ( AT5G49665.1 )
(BLAST)
001: MGTGWRRAFC TTAPRNSDAA APDLDKQRTG YNLTPSPSPR SCVKLAFLSG GSNPSTPRST SSPSLRCRTA DAQTPTAEQT STPRSATKSP RLSLAAISNP
101: SSPRSPLKLS LFRNSFKFRS TCGICLNSVK TGQGTAKYTA ECSHAFHFPC IADYVRKQGK LVCPVCNSIW KDASLLVPHK NATESPLDDS VSVIQEKRVV
201: VTSSPRAKPR PKQSDYSRFY DDDEPLLSPR FVTIPEADEN CGGEEEDDVP QFKGFVVDPN PSFAVKTNEI PVNGRDFGNV QVSLLPEAAV VSVGCGYETR
301: AVALRVKAPP PLTARGGVGR RLLDPSQRAP VDLVVVVDVG GTMNGAKLQM VKRAMRLVIS SLGSADRLSI VAVVMTVPKR LLPLKRMTEH GKRSAGAVVD
401: GLLCGQGSNT SEALKKASRV LEDRRERNPV ASIVLLTDGQ GQLSKVHTNQ RSTITNVGST RFAHIEIPVT EHGFGESGGC SNAPAEEAFA KCIGGLLSVV
501: VQDLRIQIRV GSGSGPCEIS AIYLCNGRPT LVSSGSGSVR LGDLYAGEER ELLVELRVPS TATRAYQILS VRGLFKDPST QEVVYGRDQS LRVPQAVRSS
601: SSPRIERLRS LFIATRAVAE SRRLVEYGEC TSAYHLLTSA RALLGQSGTV EAAEYIKVVE AELVEVQWRG QQLMEYQSQH QQQHNQRRRG SERETTTTMT
701: LMDENGEPLT PASAWRAAEK LAKLAMMKKS DLHGFENARF
Arabidopsis Description
WAV3E3 ubiquitin-protein ligase WAV3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.