Factsheet for GSMUA_Achr1P03730_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P03730_001
GSMUA_Achr2P11860_001
GSMUA_Achr5P10290_001
GSMUA_Achr5P10300_001
GSMUA_Achr5P13770_001
GSMUA_Achr6P21940_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr6P21940_001	AT5G15170.1	21798944
AT1G01510.1	GSMUA_AchrUn_...	AT5G15170.1	21798944
AT1G01510.1	GSMUA_AchrUn_...	AT5G15170.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P10300_001	Banana	cytosol	33.94	52.84
GSMUA_Achr5P10290_001	Banana	nucleus	30.66	48.14
Zm00001d027450_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	54.01	46.03
TraesCS4D01G315500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	53.1	45.54
TraesCS5A01G493200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.74	45.23
Zm00001d029719_P002	Maize	cytosol	52.55	45.07
HORVU1Hr1G049460.1	Barley	cytosol	53.1	45.05
Os10t0533000-01	Rice	extracellular	53.28	44.92
VIT_15s0046g02250.t01	Wine grape	cytosol, plastid	52.74	44.88
GSMUA_Achr5P13770_001	Banana	mitochondrion	41.97	44.66
TraesCS1D01G191600.1	Wheat	cytosol	52.55	44.58
TraesCS1A01G185300.2	Wheat	cytosol	52.37	44.5
TraesCS1B01G193200.1	Wheat	cytosol	52.37	44.5
PGSC0003DMT400000547	Potato	cytosol	51.09	44.37
TraesCS4B01G319000.1	Wheat	mitochondrion	41.97	43.89
Solyc01g095040.2.1	Tomato	nucleus	50.37	43.74
KRH40381	Soybean	endoplasmic reticulum	48.18	42.79
KRH00851	Soybean	endoplasmic reticulum	48.18	42.79
AT1G01510.1	Thale cress	cytosol	47.26	40.72
Os03t0126100-01	Rice	cytosol	32.3	40.32
OQU92250	Sorghum	mitochondrion	52.74	40.31
Bra033258.1-P	Field mustard	cytosol, peroxisome, plastid	45.99	39.94
CDX90038	Canola	mitochondrion, plastid	45.99	38.77
HORVU4Hr1G083270.5	Barley	mitochondrion	40.15	35.66
GSMUA_Achr2P11860_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	14.6	33.61
CDY15172	Canola	plastid	45.62	26.23
VIT_03s0088g00460.t01	Wine grape	cytosol	3.28	22.78

Protein Annotations

EnsemblPlants:GSMUA_Achr1P03730_001	EnsemblPlants:GSMUA_Achr1T03730_001	EnsemblPlantsGene:GSMUA_Achr1G03730_001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	ncoils:Coil
PANTHER:PTHR43254	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000294E104	UniProt:M0RWT1	MapMan:35.1

Description

erythronate-4-phosphate dehydrogenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G03730_001]

Coordinates

chr1:-:3088266..3095790

Molecular Weight (calculated)

60390.0 Da

IEP (calculated)

10.644

GRAVY (calculated)

-0.300

Length

548 amino acids

Sequence
(BLAST)

001: MNRSTVVIKI KKRSLRLAGP EFSKPSGRSG LALEKECTTG ACGGRRRIRI GWRRTSRCGL PQLPRGPVLG ARGPRRPAVV EHVGLSGLAG GPIESAAVVL
101: LHSLVLLPRA AQRRLRPWQL ILCFGSPDRA VNSALASDLG LRLVHVDANR AVEVADIVMA LFLGLLRRTL LLSRHSSSLS AASGWLGSIQ PLCRGMRRCR
201: GLVLGIIGKS ASARCLATRS PTFKMSVLYF DLHDEAKGKS RCSPIAFPAA AQRMDTLNDL LTESDLCALH SAEGPQWMEA WVREMPNVLI LPRSADYSAE
301: VWMEIRENDH YEQSEKWVKE SISQNTSSRS EGRRSRSGKK GKKRPAHRRS QQKSDDVSAV ESTNNCTSHH GDDTAVSGRD QVLSSSSRFA SPEDPKSKQM
401: CPFEPMMESK SGKPMALSTE LKTESPDELK DGFILALHSR GNPGFHVARQ RVPGGGWILD TITYVTKRDP AAQFAVALKA RKYLDCGLLL LVVNCCRLTE
501: KWNSYLQVIV SMCGRAGGWR VQFWTNASLS IAETHSLSWM SASRFLQR

Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)

001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID

Arabidopsis Description

ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.