CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER97314
KXG36373
OQU92250

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01510.1	OQU92250	AT1G01510.1	11889033
AT1G01510.1	OQU92250	AT1G01510.1	17972097
AT1G01510.1	OQU92250	AT1G01510.1	21798944
AT1G01510.1	EER97314	AT5G15170.1	21798944
AT1G01510.1	KXG36373	AT5G15170.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029719_P002	Maize	cytosol	83.54	93.74
TraesCS1B01G193200.1	Wheat	cytosol	75.31	83.72
TraesCS1A01G185300.2	Wheat	cytosol	75.31	83.72
TraesCS1D01G191600.1	Wheat	cytosol	75.31	83.59
HORVU1Hr1G049460.1	Barley	cytosol	75.17	83.44
VIT_03s0088g00460.t01	Wine grape	cytosol	9.07	82.28
Os10t0533000-01	Rice	extracellular	73.78	81.38
GSMUA_Achr5P10300_001	Banana	cytosol	34.17	69.6
GSMUA_Achr5P13770_001	Banana	mitochondrion	47.56	66.21
VIT_15s0046g02250.t01	Wine grape	cytosol, plastid	58.3	64.91
PGSC0003DMT400000547	Potato	cytosol	55.65	63.23
Solyc01g095040.2.1	Tomato	nucleus	55.51	63.07
KRH40381	Soybean	endoplasmic reticulum	53.97	62.72
KRH00851	Soybean	endoplasmic reticulum	53.84	62.56
GSMUA_Achr5P10290_001	Banana	nucleus	29.57	60.74
AT1G01510.1	Thale cress	cytosol	53.56	60.38
Bra033258.1-P	Field mustard	cytosol, peroxisome, plastid	52.44	59.59
CDX90038	Canola	mitochondrion, plastid	52.58	58.0
GSMUA_Achr1P03730_001	Banana	mitochondrion, nucleus, plastid	40.31	52.74
GSMUA_Achr2P11860_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	14.23	42.86
CDY15172	Canola	plastid	53.0	39.87

Protein Annotations

EnsemblPlants:OQU92250	EnsemblPlantsGene:SORBI_3001G316200	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR43254	PFAM:PF02826	ProteinID:OQU92250	ProteinID:OQU92250.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI000B8B9FC3	UniProt:A0A1Z5S8J3	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:60415497..60420313

Molecular Weight (calculated)

77709.4 Da

IEP (calculated)

7.369

GRAVY (calculated)

-0.322

Length

717 amino acids

Sequence
(BLAST)

001: MMAAWHLLRV PGGSNPGAPC AETEARTARG RTGRFHCIAS ARPAPHTHKE NSSQPDQTGA RAQSAPRSAP ATGRPKGPEK MLHGPAHSAS PATAAAGGGV
101: QPLVVALNCL EDPSLEQEAL SGAAAVEHAP LSSLSAGRVE AAAAVLLPSL AFLPRAAQRR LRPWQLLLCL GSPERAADAA AAAELGLRLV HVDANRAEEV
201: ADTVMALFLG LLRRTHLLSR HASSSSPTAG WLGSVQPLCR GMRRCRGLVL GIIGVNAAAR CLATRSLAFR MSVLYFDPIY EVTGKVKRPS IVFPSAARRM
301: DTLNDLLAAS DLVSLHCALT NDTTHILNAE RLQHIKPGAF IVNTGSCQLI DDCALKQLLI DGTIAGCALD GAEGPQWMEA WVHEMPNVLI LPRSADYSEE
401: VWMEIREKAI AILQSFLYDG VVPNNVISDE DEEISEVGCD DDQLAKQEKE HALQICDGEQ QTEESQLTAE YDKRRAISQP EEPQASAQSH TIGSRSEGRR
501: SRSGKKGKKR PARRRSQQKM DELSTVEGGS NYSSRRDDDN QVLSSSSRFA SPEDSKNKHK SSVESPMEII SENKLPAGLG RKPPEKLKEG FVIALKTRDN
601: SGFYVSRERV AGGGWYLDVI PNATKRDPAA QFLVTFRNKD TMGLRSFVAG GKLLQANNKM EFVFTSHSFD VCESWMLEGS LSECCKLVNR KNSLAVLEVY
701: IEVLGAPSED GVVRWLD

Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)

001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID

Arabidopsis Description

ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.