Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021669_P008 | Maize | plastid | 93.26 | 93.68 |
| HORVU2Hr1G045160.1 | Barley | cytosol, nucleus | 12.87 | 90.53 |
| HORVU2Hr1G045220.3 | Barley | plastid | 82.48 | 82.36 |
| TraesCS2B01G244300.1 | Wheat | plastid | 82.34 | 82.34 |
| TraesCS2A01G218900.1 | Wheat | plastid | 82.34 | 82.21 |
| TraesCS2D01G224500.1 | Wheat | plastid | 81.89 | 81.76 |
| Os07t0530100-01 | Rice | plastid | 80.54 | 80.18 |
| GSMUA_AchrUn_... | Banana | golgi, mitochondrion | 44.31 | 67.73 |
| Bra006287.1-P | Field mustard | nucleus | 55.39 | 60.46 |
| AT5G15170.1 | Thale cress | nucleus | 54.64 | 60.33 |
| VIT_10s0116g00450.t01 | Wine grape | plastid | 60.33 | 59.44 |
| Solyc03g031820.2.1 | Tomato | nucleus | 57.04 | 59.07 |
| KRH61715 | Soybean | nucleus | 55.84 | 57.65 |
| PGSC0003DMT400061871 | Potato | nucleus | 43.11 | 56.36 |
| CDX78616 | Canola | endoplasmic reticulum, golgi, vacuole | 55.09 | 54.28 |
| CDX70598 | Canola | nucleus | 54.49 | 47.71 |
| CDY43825 | Canola | mitochondrion | 5.99 | 44.44 |
| EER97314 | Sorghum | cytosol, peroxisome, plastid | 3.14 | 18.26 |
Protein Annotations
| MapMan:14.10.2 | Gene3D:2.60.200.20 | Gene3D:3.30.870.10 | Gene3D:3.30.870.20 | UniProt:A0A1B6QEP1 | InterPro:FHA_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 |
| GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR000253 |
| InterPro:IPR027415 | ProteinID:KXG36372.1 | EnsemblPlants:KXG36373 | ProteinID:KXG36373 | ProteinID:KXG36373.1 | PFAM:PF06087 |
| PANTHER:PTHR12415 | PANTHER:PTHR12415:SF0 | InterPro:SMAD_FHA_dom_sf | EnsemblPlantsGene:SORBI_3002G324300 | SUPFAM:SSF49879 | SUPFAM:SSF56024 |
| InterPro:TDP_C | InterPro:Tdp1 | UniParc:UPI00081ABC77 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:-:69506442..69518378
Molecular Weight (calculated)
74833.0 Da
IEP (calculated)
9.707
GRAVY (calculated)
-0.350
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASRVRLG TLVPLTKDNA GSSNGSVSNI PIFQGSNVVG RDHLVVVDKR ISRKHLSLHA STDGSIEVVV EGPNPIMVRS NGQRRKVCAT GKAKIAHGDV
101: LELIPGDYFV KYVDMGDEHK ISVPMHLSDL KKGKRHSEED SAAVKRNRQI MEDEALARTL QESFAEDNTA VSGMTSGQKI SSHDSAGSSG RNNERKHSIG
201: PLKDMLPLTF RLMRVQGLPS WTNTSSVSIQ DVIQGEVLLA VLSNYMVDID WLLTACPSLK KVPHVLVLHG QDGASLELMK KLKPANWILH KPPLPISFGT
301: HHSKAMLLVY PQGIRIVVHT ANLIHVDWNY KSQGLWMQDF PWKDTNDMNN KVPFENDLVD YLSALKWPEF SVNLPEVGDV NINAAFFRKF DYRNSMVRLI
401: GSVPGYHVGP NIRKWGHMKL RNVLDEITFN KQFCKSPLIY QFSSLGSLDE KWMSEFACSL SAGKSDDGSQ LGIGKPLIVW PTVEDVRCSI EGYAAGSCIP
501: SPQKNVEKDF LKKYWSRWKA DHVGRCRAMP HIKTFTRYSG QNIAWFLLTS SNLSKAAWGA LQKNNTQLMI RSYELGVLFL PQTLQSIPQF SCTEKSRSSR
601: DGVAIGRTIK TKLVTLCWKG DEEDPSIVKL PVPYQLPPQP YGTQDVPWSW DRRYTKKDVY GSVWPRHG
101: LELIPGDYFV KYVDMGDEHK ISVPMHLSDL KKGKRHSEED SAAVKRNRQI MEDEALARTL QESFAEDNTA VSGMTSGQKI SSHDSAGSSG RNNERKHSIG
201: PLKDMLPLTF RLMRVQGLPS WTNTSSVSIQ DVIQGEVLLA VLSNYMVDID WLLTACPSLK KVPHVLVLHG QDGASLELMK KLKPANWILH KPPLPISFGT
301: HHSKAMLLVY PQGIRIVVHT ANLIHVDWNY KSQGLWMQDF PWKDTNDMNN KVPFENDLVD YLSALKWPEF SVNLPEVGDV NINAAFFRKF DYRNSMVRLI
401: GSVPGYHVGP NIRKWGHMKL RNVLDEITFN KQFCKSPLIY QFSSLGSLDE KWMSEFACSL SAGKSDDGSQ LGIGKPLIVW PTVEDVRCSI EGYAAGSCIP
501: SPQKNVEKDF LKKYWSRWKA DHVGRCRAMP HIKTFTRYSG QNIAWFLLTS SNLSKAAWGA LQKNNTQLMI RSYELGVLFL PQTLQSIPQF SCTEKSRSSR
601: DGVAIGRTIK TKLVTLCWKG DEEDPSIVKL PVPYQLPPQP YGTQDVPWSW DRRYTKKDVY GSVWPRHG
001: MAHSQVAYLI PLKADLKEDN SSPRITLSEG PNIIGRGNVS IVDKRLSRKH ITIIVSTSGS ASLSVDGTNP VVIRSSGDGE RKKVKPSEEV SVCNDDLIEL
101: IPGHHFFKLV LLNGRAAKKA RKAEDDVEAI RRFCPPNEKL PSTFRLLSVD ALPDWANTSC VSINDVIEGD VVAAILSNYM VDIDWLMSAC PKLANIPQVM
201: VIHGEGDGRQ EYIQRKKPAN WILHKPRLPI SFGTHHSKAI FLVYPRGVRV VVHTANLIHV DWNNKSQGLW MQDFPWKDDD KDPPKGCGFE GDLIDYLNVL
301: KWPEFTANLP GRGNVKINAA FFKKFDYSDA TVRLIASVPG YHTGFNLNKW GHMKLRTILQ ECIFDREFRR SPLIYQFSSL GSLDEKWLAE FGNSLSSGIT
401: EDKTPLGPGD SLIIWPTVED VRCSLEGYAA GNAIPSPLKN VEKPFLKKYW ARWKADHSAR GRAMPHIKTF TRYNDQKIAW FLLTSSNLSK AAWGALQKNN
501: SQLMIRSYEL GVLFLPSPIK TQGCVFSCTE SNPSVMKAKQ ETKDEVEKRS KLVTMTWQGD RDLPEIISLP VPYQLPPKPY SPEDVPWSWD RGYSKKDVYG
601: QVWPR
101: IPGHHFFKLV LLNGRAAKKA RKAEDDVEAI RRFCPPNEKL PSTFRLLSVD ALPDWANTSC VSINDVIEGD VVAAILSNYM VDIDWLMSAC PKLANIPQVM
201: VIHGEGDGRQ EYIQRKKPAN WILHKPRLPI SFGTHHSKAI FLVYPRGVRV VVHTANLIHV DWNNKSQGLW MQDFPWKDDD KDPPKGCGFE GDLIDYLNVL
301: KWPEFTANLP GRGNVKINAA FFKKFDYSDA TVRLIASVPG YHTGFNLNKW GHMKLRTILQ ECIFDREFRR SPLIYQFSSL GSLDEKWLAE FGNSLSSGIT
401: EDKTPLGPGD SLIIWPTVED VRCSLEGYAA GNAIPSPLKN VEKPFLKKYW ARWKADHSAR GRAMPHIKTF TRYNDQKIAW FLLTSSNLSK AAWGALQKNN
501: SQLMIRSYEL GVLFLPSPIK TQGCVFSCTE SNPSVMKAKQ ETKDEVEKRS KLVTMTWQGD RDLPEIISLP VPYQLPPKPY SPEDVPWSWD RGYSKKDVYG
601: QVWPR
Arabidopsis Description
TDP1Tyrosyl-DNA phosphodiesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.