Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021668_P002 | Maize | cytoskeleton, cytosol, peroxisome | 99.13 | 99.13 |
| Os07t0529800-01 | Rice | extracellular | 98.26 | 98.26 |
| Bra006287.1-P | Field mustard | nucleus | 21.74 | 4.08 |
| KRH61715 | Soybean | nucleus | 22.61 | 4.02 |
| AT5G15170.1 | Thale cress | nucleus | 20.87 | 3.97 |
| PGSC0003DMT400061871 | Potato | nucleus | 16.52 | 3.72 |
| CDX78616 | Canola | endoplasmic reticulum, golgi, vacuole | 21.74 | 3.69 |
| Solyc03g031820.2.1 | Tomato | nucleus | 20.0 | 3.57 |
| CDX70598 | Canola | nucleus | 22.61 | 3.41 |
| VIT_10s0116g00450.t01 | Wine grape | plastid | 20.0 | 3.39 |
| CDY43825 | Canola | mitochondrion | 2.61 | 3.33 |
| KXG36373 | Sorghum | plastid | 18.26 | 3.14 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus | 2.61 | 2.83 |
Protein Annotations
| MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | UniProt:C5XA40 | EnsemblPlants:EER97314 | ProteinID:EER97314 | ProteinID:EER97314.2 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR001950 | PFAM:PF01253 | PIRSF:PIRSF004499 | PFscan:PS50296 | PANTHER:PTHR10388 |
| PANTHER:PTHR10388:SF35 | EnsemblPlantsGene:SORBI_3002G324200 | SUPFAM:SSF55159 | InterPro:SUI1 | InterPro:SUI1_dom_sf | InterPro:SUI1_euk |
| TIGRFAMs:TIGR01160 | UniParc:UPI00016FC7F0 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:69501546..69504021
Molecular Weight (calculated)
12691.2 Da
IEP (calculated)
9.209
GRAVY (calculated)
-0.437
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDLDVQIPT AFDPFAEANA GDSGAAAGSK DYVHVRIQQR NGRKSLTTVQ GLKKEFSYSK ILKDLKKEFC CNGTVVQDPE LGQVIQLQGD QRKNVSNFLV
101: QAGIVKKEHI KIHGF
101: QAGIVKKEHI KIHGF
001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.