Factsheet for Os07t0529800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
peroxisome 1
mitochondrion 2
plastid 1
cytosol 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

extracellular: 18372294

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021668_P002	Maize	cytoskeleton, cytosol, peroxisome	99.13	99.13
EER97314	Sorghum	cytosol, peroxisome, plastid	98.26	98.26
Bra006287.1-P	Field mustard	nucleus	21.74	4.08
KRH61715	Soybean	nucleus	22.61	4.02
AT5G15170.1	Thale cress	nucleus	20.87	3.97
PGSC0003DMT400061871	Potato	nucleus	16.52	3.72
CDX78616	Canola	endoplasmic reticulum, golgi, vacuole	21.74	3.69
Solyc03g031820.2.1	Tomato	nucleus	20.0	3.57
CDX70598	Canola	nucleus	22.61	3.41
VIT_10s0116g00450.t01	Wine grape	plastid	20.0	3.39
CDY43825	Canola	mitochondrion	2.61	3.33
Os07t0530100-01	Rice	plastid	18.26	3.13
GSMUA_AchrUn_...	Banana	cytosol, nucleus	2.61	2.83

Protein Annotations

MapMan:17.4.1.1.1	Gene3D:3.30.780.10	EntrezGene:4343445	EMBL:AF094774	EMBL:AK120697	UniProt:B7F683
ProteinID:BAC45143.1	ProteinID:BAF21757.1	ProteinID:BAT01869.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003743	GO:GO:0005488	GO:GO:0006412	GO:GO:0006413	GO:GO:0006417	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR001950
EMBL:JN944373	EMBL:KM982770	EnsemblPlantsGene:Os07g0529800	EnsemblPlants:Os07t0529800-01	PFAM:PF01253	PIRSF:PIRSF004499
PFscan:PS50296	PANTHER:PTHR10388	PANTHER:PTHR10388:SF35	UniProt:Q0D5W6	SUPFAM:SSF55159	InterPro:SUI1
InterPro:SUI1_dom_sf	InterPro:SUI1_euk	TIGRFAMs:TIGR01160	UniParc:UPI0000000ACA	RefSeq:XP_015646619.1	SEG:seg

Description

translation initiation factor eIF1, protein translation factor SUI1Protein translation factor SUI1 homolog (GOS2 protein). (Os07t0529800-01)

Coordinates

chr7:-:20733236..20735266

Molecular Weight (calculated)

12732.2 Da

IEP (calculated)

9.209

GRAVY (calculated)

-0.457

Length

115 amino acids

Sequence
(BLAST)

001: MSDLDIQIPT AFDPFAEANA GDSGAAAGSK DYVHVRIQQR NGRKSLTTVQ GLKKEFSYNK ILKDLKKEFC CNGTVVQDPE LGQVIQLQGD QRKNVSNFLV
101: QAGIVKKEHI KIHGF

Best Arabidopsis Sequence Match ( AT1G54290.1 )
(BLAST)

001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF

Arabidopsis Description

Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.