Factsheet for GSMUA_Achr5P10290_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P03730_001
GSMUA_Achr2P11860_001
GSMUA_Achr5P10290_001
GSMUA_Achr5P10300_001
GSMUA_Achr5P13770_001
GSMUA_Achr6P21940_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr6P21940_001	AT5G15170.1	21798944
AT1G01510.1	GSMUA_AchrUn_...	AT5G15170.1	21798944
AT1G01510.1	GSMUA_AchrUn_...	AT5G15170.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0126100-01	Rice	cytosol	67.62	53.76
GSMUA_Achr5P13770_001	Banana	mitochondrion	67.05	45.44
TraesCS4B01G319000.1	Wheat	mitochondrion	66.19	44.08
Zm00001d027450_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	66.19	35.93
TraesCS5A01G493200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	65.62	35.84
TraesCS4D01G315500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	65.62	35.84
GSMUA_Achr2P11860_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	23.78	34.87
TraesCS1A01G185300.2	Wheat	cytosol	63.61	34.42
HORVU1Hr1G049460.1	Barley	cytosol	63.32	34.21
TraesCS1D01G191600.1	Wheat	cytosol	63.04	34.06
TraesCS1B01G193200.1	Wheat	cytosol	62.75	33.95
VIT_15s0046g02250.t01	Wine grape	cytosol, plastid	61.6	33.39
Zm00001d029719_P002	Maize	cytosol	61.03	33.33
Os10t0533000-01	Rice	extracellular	60.46	32.46
GSMUA_Achr1P03730_001	Banana	mitochondrion, nucleus, plastid	48.14	30.66
KRH40381	Soybean	endoplasmic reticulum	53.3	30.15
HORVU4Hr1G083270.5	Barley	mitochondrion	53.3	30.15
KRH00851	Soybean	endoplasmic reticulum	53.01	29.98
PGSC0003DMT400000547	Potato	cytosol	54.15	29.95
AT1G01510.1	Thale cress	cytosol	54.44	29.87
Solyc01g095040.2.1	Tomato	nucleus	53.87	29.79
OQU92250	Sorghum	mitochondrion	60.74	29.57
Bra033258.1-P	Field mustard	cytosol, peroxisome, plastid	52.44	29.0
CDX90038	Canola	mitochondrion, plastid	51.29	27.54
CDY15172	Canola	plastid	51.0	18.68
VIT_03s0088g00460.t01	Wine grape	cytosol	0.86	3.8
GSMUA_Achr5P10300_001	Banana	cytosol	2.58	2.56

Protein Annotations

EnsemblPlants:GSMUA_Achr5P10290_001	EnsemblPlants:GSMUA_Achr5T10290_001	EnsemblPlantsGene:GSMUA_Achr5G10290_001	PANTHER:PTHR43254	SEG:seg	UniParc:UPI0002966150
UniProt:M0SXA8	MapMan:35.1	:	:	:	:

Description

erythronate-4-phosphate dehydrogenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G10290_001]

Coordinates

chr5:-:7351204..7358947

Molecular Weight (calculated)

39136.2 Da

IEP (calculated)

6.797

GRAVY (calculated)

-0.594

Length

349 amino acids

Sequence
(BLAST)

001: MGIKLHVREM PNVLILPRSA DYSEEVWMEI REKAITILQS FIFEGVVPEI AVSDEDDMSE AGYEDVQSEK RVKESPFQVQ DCEQQTDESH LSSEYTKTKG
101: IQQFKESQGS GISQNTGSRS EGRRSRSGRK GKKRPARRRS QQKSDDFSAV ESDTNYNSHR GDDTAVSGRD QLLSSSSRFA SPEDPKSKQM CLFEPMMETK
201: SGKQLALSTE INSKSPERLK DGFIVALHAR GNSGFHVARQ RVPGGGWFLD TVTNVTKRDP AAQFVVAFKS KDILGLRSFA AGGKLLQINR KMEFIFASHS
301: FDVRESWMLE GSVLEQCKIV NCRNPLAVLD VSIEIIAVLN EDGITRWLD

Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)

001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID

Arabidopsis Description

ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.