Factsheet for Os03t0126100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0126100-01
Os07t0529800-01
Os07t0530100-01
Os10t0533000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01510.1	Os03t0126100-01	AT1G01510.1	11889033
AT1G01510.1	Os10t0533000-01	AT1G01510.1	11889033
AT1G01510.1	Os03t0126100-01	AT1G01510.1	17972097
AT1G01510.1	Os10t0533000-01	AT1G01510.1	17972097
AT1G01510.1	Os03t0126100-01	AT1G01510.1	21798944
AT1G01510.1	Os10t0533000-01	AT1G01510.1	21798944
AT1G01510.1	Os07t0529800-01	AT5G15170.1	21798944
AT1G01510.1	Os07t0530100-01	AT5G15170.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0088g00460.t01	Wine grape	cytosol	14.81	82.28
TraesCS4B01G319000.1	Wheat	mitochondrion	86.79	72.71
GSMUA_Achr5P10290_001	Banana	nucleus	53.76	67.62
TraesCS4D01G315500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	86.79	59.62
TraesCS5A01G493200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	85.88	59.0
Zm00001d027450_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	85.42	58.32
GSMUA_Achr5P13770_001	Banana	mitochondrion	65.6	55.92
HORVU4Hr1G083270.5	Barley	mitochondrion	74.49	53.0
Os10t0533000-01	Rice	extracellular	78.13	52.77
VIT_15s0046g02250.t01	Wine grape	cytosol, plastid	65.83	44.88
KRH00851	Soybean	endoplasmic reticulum	61.05	43.44
KRH40381	Soybean	endoplasmic reticulum	61.05	43.44
Solyc01g095040.2.1	Tomato	nucleus	61.73	42.95
AT1G01510.1	Thale cress	cytosol	62.19	42.92
PGSC0003DMT400000547	Potato	cytosol	61.5	42.79
Bra033258.1-P	Field mustard	cytosol, peroxisome, plastid	58.77	40.89
CDX90038	Canola	mitochondrion, plastid	58.54	39.54
GSMUA_Achr2P11860_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	17.77	32.77
GSMUA_Achr1P03730_001	Banana	mitochondrion, nucleus, plastid	40.32	32.3
CDY15172	Canola	plastid	58.09	26.76
GSMUA_Achr5P10300_001	Banana	cytosol	21.41	26.7

Protein Annotations

EnsemblPlants:Os03t0126100-01	EnsemblPlantsGene:Os03g0126100	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd	InterPro:NAD(P)-bd_dom_sf
ncoils:Coil	PANTHER:PTHR43254	PFAM:PF02826	ProteinID:BAF10737.1	ProteinID:BAS82077.1	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0000E11EEB	UniProt:Q0DVK1	MapMan:35.1	:	:

Description

Similar to Arabidopsis thaliana DNA, 40 kb surrounding ACS1 locus. (Os03t0126100-01)

Coordinates

chr3:-:1494308..1497245

Molecular Weight (calculated)

48898.6 Da

IEP (calculated)

5.573

GRAVY (calculated)

-0.508

Length

439 amino acids

Sequence
(BLAST)

001: KAKRPSIVFP SAARRMDTLN DLLAASDLVS LHCTLTNDTM HILNADCLQH VKPGAFIVNT GSCQLIDDCA LKQLLIDGTI AGCALDGAEG PQWMEAWVRE
101: MPNVLILPRS ADYSEEVWME IREKAITILQ SFFFDGAVPS SAISDEDEEI SEAGNEDDQL EEKVSSSQVF YSEQQTDESQ LKMEYEKRRA ISQHKEPQAS
201: ARSQHIVPRS EGRRSRSGKK GKKRPARRRS QQKTDELSAV ESGSNYSSRR DDDTAMSGRD QVLSSSSRFA SPEDSKYKQK SPAESPMEIT SETKLPTVLR
301: RKYPDTLKDG FVVALRTKDN SGFHVARQRL AGGGGWILDI VSNATNRDPA AQFLVTFKNK DTMGLRSFVA GGKLLQINRR MEFVFASHTF DVWESWMLEG
401: SLLEGCKLIN CRNSSAVLDV CIEILAAASE EDGVTRWLD

Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)

001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID

Arabidopsis Description

ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.