Factsheet for Bra033258.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006287.1-P
Bra033258.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01510.1	Bra033258.1-P	AT1G01510.1	11889033
AT1G01510.1	Bra033258.1-P	AT1G01510.1	17972097
AT1G01510.1	Bra033258.1-P	AT1G01510.1	21798944
AT1G01510.1	Bra006287.1-P	AT5G15170.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90038	Canola	mitochondrion, plastid	96.36	93.54
AT1G01510.1	Thale cress	cytosol	91.76	91.04
VIT_03s0088g00460.t01	Wine grape	cytosol	10.3	82.28
KRH40381	Soybean	endoplasmic reticulum	70.05	71.64
KRH00851	Soybean	endoplasmic reticulum	69.1	70.66
VIT_15s0046g02250.t01	Wine grape	cytosol, plastid	70.84	69.41
PGSC0003DMT400000547	Potato	cytosol	67.19	67.19
Solyc01g095040.2.1	Tomato	nucleus	66.88	66.88
GSMUA_Achr5P10300_001	Banana	cytosol	36.45	65.34
CDY15172	Canola	plastid	96.2	63.69
GSMUA_Achr5P13770_001	Banana	mitochondrion	49.13	60.19
Zm00001d027450_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	61.33	60.19
TraesCS4D01G315500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	60.86	60.09
TraesCS4B01G319000.1	Wheat	mitochondrion	49.6	59.73
TraesCS5A01G493200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	60.38	59.62
Os03t0126100-01	Rice	cytosol	40.89	58.77
HORVU1Hr1G049460.1	Barley	cytosol	60.06	58.67
Os10t0533000-01	Rice	extracellular	60.38	58.62
TraesCS1A01G185300.2	Wheat	cytosol	59.9	58.6
Zm00001d029719_P002	Maize	cytosol	58.95	58.22
TraesCS1D01G191600.1	Wheat	cytosol	59.59	58.2
TraesCS1B01G193200.1	Wheat	cytosol	59.27	57.98
OQU92250	Sorghum	mitochondrion	59.59	52.44
GSMUA_Achr5P10290_001	Banana	nucleus	29.0	52.44
GSMUA_Achr1P03730_001	Banana	mitochondrion, nucleus, plastid	39.94	45.99
HORVU4Hr1G083270.5	Barley	mitochondrion	43.11	44.08
GSMUA_Achr2P11860_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	15.21	40.34

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra033258	EnsemblPlants:Bra033258.1	EnsemblPlants:Bra033258.1-P	InterPro:D-isomer_DH_NAD-bd
GO:GO:0000003	GO:GO:0000166	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005802
GO:GO:0005829	GO:GO:0006950	GO:GO:0006970	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008360	GO:GO:0009628	GO:GO:0009651	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908
GO:GO:0009965	GO:GO:0009987	GO:GO:0010091	GO:GO:0010482	GO:GO:0010494	GO:GO:0016043
GO:GO:0016049	GO:GO:0030154	GO:GO:0031129	GO:GO:0034063	GO:GO:0040007	GO:GO:0042802
GO:GO:0042803	GO:GO:0042814	GO:GO:0045604	GO:GO:0048444	GO:GO:0048530	GO:GO:0051287
GO:GO:0055114	GO:GO:2000039	UniProt:M4EWS3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF02826	PANTHER:PTHR43254
SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI000254515E	SEG:seg	:	:

Description

AT1G01510 (E=3e-295) AN | AN (ANGUSTIFOLIA); protein binding

Coordinates

chrA10:+:4638198..4640714

Molecular Weight (calculated)

69693.1 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.271

Length

631 amino acids

Sequence
(BLAST)

001: MSKIRSSATM PHREQPSPLV VTLNCVEDCA LEQDSLAGVA GVEYVPLSRI ADGKIESATA VLIHSLAYLP RAAQRRLRPH QLILCLGSAD RAVDSTLAAD
101: LGLRLVHVDT SRAEEIADTV MALILGLLRR THLLSRHALS ASGWLGSLQP LCRGMRRCRG MVLGIIGRSV SARYLASRSL AFKMSVLYFD VPEGDEERIR
201: PSRFPRAARR MDTLNDLLAA SDVISLHCAL TDNTVQILNA ECLQHIKPGA FLVNTGSCQL LDDCAVKQLL IDGTIAGCAI DGAEGPQWME AWVKEMPNVL
301: ILPRSADYSE EVWMEIREKA ISILQSFFLD GVIPTNTVSD EEVEESEASD EEEQSPIRHG KLALVESTSR QQQGESTLTS TDIVPIEASE FKESLSPGQN
401: TAIKPEVRRS RSGKKAKKRH SQQKHMQRAE GSSGLHEESS TSRREDIAMS DSEEVLSSSS RCVSPEDSRS RKTPLEVMQQ QSSQNQLVRS SKKFIGKSSE
501: LLKDGYVIAM YAKDLSGLHV SRQRTKNGGW FLDTLSNVSK RDPAAQFIIA YRNKDTVGLR SFAAGGKLLQ INRRMEFVFA SHSFDVWESW SLEGSLDECR
601: LVNCRNSSAS LEVRVEILAI VGDDGVTRWI D

Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)

001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID

Arabidopsis Description

ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.