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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:cytosol
plasma membrane: 18260611
extracellular: 26072143
extracellular: 28232208
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G191600.1 Wheat cytosol 84.77 85.29
TraesCS1B01G193200.1 Wheat cytosol 84.62 85.27
TraesCS1A01G185300.2 Wheat cytosol 84.46 85.12
HORVU1Hr1G049460.1 Barley cytosol 84.46 84.98
Zm00001d029719_P002 Maize cytosol 82.31 83.72
VIT_03s0088g00460.t01 Wine grape cytosol 9.85 81.01
Os03t0126100-01 Rice cytosol 52.77 78.13
OQU92250 Sorghum mitochondrion 81.38 73.78
GSMUA_Achr5P10300_001 Banana cytosol 37.69 69.6
GSMUA_Achr5P13770_001 Banana mitochondrion 52.77 66.6
VIT_15s0046g02250.t01 Wine grape cytosol, plastid 64.15 64.75
KRH40381 Soybean endoplasmic reticulum 60.92 64.18
KRH00851 Soybean endoplasmic reticulum 60.77 64.02
PGSC0003DMT400000547 Potato cytosol 61.85 63.71
Solyc01g095040.2.1 Tomato nucleus 61.85 63.71
AT1G01510.1 Thale cress cytosol 60.31 61.64
GSMUA_Achr5P10290_001 Banana nucleus 32.46 60.46
Bra033258.1-P Field mustard cytosol, peroxisome, plastid 58.62 60.38
CDX90038 Canola mitochondrion, plastid 58.46 58.46
GSMUA_Achr1P03730_001 Banana mitochondrion, nucleus, plastid 44.92 53.28
GSMUA_Achr2P11860_001 Banana cytosol, mitochondrion, nucleus, peroxisome 16.46 44.96
CDY15172 Canola plastid 58.31 39.77
Protein Annotations
Gene3D:3.40.50.720MapMan:35.1EntrezGene:4349220ProteinID:AAM88629.1ProteinID:AAP54786.1EMBL:AK111576
EMBL:AK120838ProteinID:BAF27066.1ProteinID:BAT11795.1InterPro:D-isomer_DH_NAD-bdGO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0051287GO:GO:0055114InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os10g0533000EnsemblPlants:Os10t0533000-01PFAM:PF02826PANTHER:PTHR43254UniProt:Q8LN38SUPFAM:SSF51735
UniParc:UPI00000A30E0RefSeq:XP_015614671.1SEG:seg:::
Description
NAD(P)-binding domain containing protein. (Os10t0533000-01)
Coordinates
chr10:+:20725051..20731000
Molecular Weight (calculated)
70670.4 Da
IEP (calculated)
6.260
GRAVY (calculated)
-0.179
Length
650 amino acids
Sequence
(BLAST)
001: MLHGPAHSPP PAAAAVAVAG GGGGEPLVVT LNCLEDPSME QEVLAGAAAV EHAPLSALSS GRVEAAAAVL LTSLAFLPRA AQRRLRPWQL ILCLGSPDRA
101: ADAAVAAELG LRLVHVDANR AEEVADTVMA LFLGLLRRTH LLSRHASSYS APPAGWLGSV QPLCRGMRRC RGLVLGIVGV NAAARCLATR SLAFSMSVLY
201: FDPLHEANGK TKRPSILFPS AARRMDTLND LLTASDLVSL HCALTNDTTH ILNAERLQHI KPGAFIVNTG SCQLIDDCAL KQLLIDGTIA GCALDGAEGP
301: QWMEAWVREM PNVLILPRSA DYSEEVWIEI REKALAILQS FFYDGVVPNN ALSDDEEEIT EAGCEDDQLA KQAKEQVCDG GQQTDESQLT LECDKRRAIS
401: HSEEPQASGQ SQNRENVVPR SEGRRSRSGK KGKKRPARRK SQQKRDELLS TLEGGSNYSS RMDDDTVTSG KDQVLSSSSR FASPEDCKTK LRSSAEFPME
501: IISENKLTAG LSIKPLERLK DGFVVALRTR DNSGFHVARE RVAGVGWYLD VVSKATKRDP AAQFLITFRN KDTMGLRSFV AGGKLLQVNK TMELVFASYS
601: FDVWESWTLE GSLLDCCKLV NRKIPSVVLE VYIEILAAVS EEDGVTRWLD
Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)
001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID
Arabidopsis Description
ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.