Factsheet for GSMUA_Achr5P10300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P03730_001
GSMUA_Achr2P11860_001
GSMUA_Achr5P10290_001
GSMUA_Achr5P10300_001
GSMUA_Achr5P13770_001
GSMUA_Achr6P21940_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	11889033
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	17972097
AT1G01510.1	GSMUA_Achr1P03730_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr2P11860_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P10290_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P10300_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr5P13770_001	AT1G01510.1	21798944
AT1G01510.1	GSMUA_Achr6P21940_001	AT5G15170.1	21798944
AT1G01510.1	GSMUA_AchrUn_...	AT5G15170.1	21798944
AT1G01510.1	GSMUA_AchrUn_...	AT5G15170.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0088g00460.t01	Wine grape	cytosol	18.18	81.01
TraesCS4D01G315500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	70.17	38.65
TraesCS5A01G493200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	69.6	38.34
Os10t0533000-01	Rice	extracellular	69.6	37.69
Zm00001d027450_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	68.75	37.64
VIT_15s0046g02250.t01	Wine grape	cytosol, plastid	68.75	37.58
Zm00001d029719_P002	Maize	cytosol	68.18	37.56
KRH40381	Soybean	endoplasmic reticulum	65.34	37.28
KRH00851	Soybean	endoplasmic reticulum	65.06	37.12
Bra033258.1-P	Field mustard	cytosol, peroxisome, plastid	65.34	36.45
HORVU1Hr1G049460.1	Barley	cytosol	66.48	36.22
TraesCS1D01G191600.1	Wheat	cytosol	66.48	36.22
TraesCS1B01G193200.1	Wheat	cytosol	66.19	36.12
PGSC0003DMT400000547	Potato	cytosol	64.49	35.97
Solyc01g095040.2.1	Tomato	nucleus	64.49	35.97
TraesCS1A01G185300.2	Wheat	cytosol	65.91	35.97
AT1G01510.1	Thale cress	cytosol	64.49	35.69
CDX90038	Canola	mitochondrion, plastid	65.06	35.23
OQU92250	Sorghum	mitochondrion	69.6	34.17
GSMUA_Achr1P03730_001	Banana	mitochondrion, nucleus, plastid	52.84	33.94
GSMUA_Achr5P13770_001	Banana	mitochondrion	46.31	31.65
TraesCS4B01G319000.1	Wheat	mitochondrion	45.74	30.73
HORVU4Hr1G083270.5	Barley	mitochondrion	45.17	25.77
CDY15172	Canola	plastid	65.06	24.03
Os03t0126100-01	Rice	cytosol	26.7	21.41
GSMUA_Achr2P11860_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	10.51	15.55
GSMUA_Achr5P10290_001	Banana	nucleus	2.56	2.58

Protein Annotations

EnsemblPlants:GSMUA_Achr5P10300_001	EnsemblPlants:GSMUA_Achr5T10300_001	EnsemblPlantsGene:GSMUA_Achr5G10300_001	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43254	PFAM:PF02826	SEG:seg	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI000295FF50	UniProt:M0SXA9	MapMan:35.1	:	:	:

Description

erythronate-4-phosphate dehydrogenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G10300_001]

Coordinates

chr5:-:7360286..7364739

Molecular Weight (calculated)

38215.4 Da

IEP (calculated)

8.134

GRAVY (calculated)

0.141

Length

352 amino acids

Sequence
(BLAST)

001: MASAERQRRS WRTESGGERG GGEGDGRPVG GLPLVVSLNC LEDPSLEREA LAGAAAVEYV GLPGLSSGRI ESATAVLIHS LALLPRAAQR RLRPWQLILC
101: LGSPDRAVDS ALAADLGLRL VHVDANRAEE VADTVMALFL GLLRRTHLLS RHSSSSSAAS GWLGSIQPLC RGMRRCRGLV LGIIGRSASA RCLATRSLAF
201: KMSVLYFDLH HEVNGKSRRS SIAFPAAARR MDTLNDLLAA SDLVSLHCSL SDDTMHILNA ECLQHIKPGA FVVNTGSSQL IDDCALKQLL IDGTIAGCAL
301: DGVEGPQWME AWLLLFNRKF VSLHQTIFHN TLQMRMAHCI FFIVEFLTFH SM

Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)

001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID

Arabidopsis Description

ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.