CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70598
CDX78616
CDX90038
CDY15172
CDY43825

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01510.1	CDX90038	AT1G01510.1	11889033
AT1G01510.1	CDY15172	AT1G01510.1	11889033
AT1G01510.1	CDX90038	AT1G01510.1	17972097
AT1G01510.1	CDY15172	AT1G01510.1	17972097
AT1G01510.1	CDX90038	AT1G01510.1	21798944
AT1G01510.1	CDY15172	AT1G01510.1	21798944
AT1G01510.1	CDX70598	AT5G15170.1	21798944
AT1G01510.1	CDX78616	AT5G15170.1	21798944
AT1G01510.1	CDY43825	AT5G15170.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033258.1-P	Field mustard	cytosol, peroxisome, plastid	63.69	96.2
CDX90038	Canola	mitochondrion, plastid	65.37	95.85
AT1G01510.1	Thale cress	cytosol	59.71	89.47
VIT_03s0088g00460.t01	Wine grape	cytosol	6.82	82.28
KRH40381	Soybean	endoplasmic reticulum	45.96	70.99
KRH00851	Soybean	endoplasmic reticulum	45.44	70.18
VIT_15s0046g02250.t01	Wine grape	cytosol, plastid	46.17	68.32
PGSC0003DMT400000547	Potato	cytosol	44.39	67.04
Solyc01g095040.2.1	Tomato	nucleus	44.18	66.72
GSMUA_Achr5P10300_001	Banana	cytosol	24.03	65.06
Zm00001d027450_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.5	60.03
TraesCS4D01G315500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	39.98	59.62
GSMUA_Achr5P13770_001	Banana	mitochondrion	32.11	59.42
TraesCS4B01G319000.1	Wheat	mitochondrion	32.53	59.16
TraesCS5A01G493200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	39.66	59.15
HORVU1Hr1G049460.1	Barley	cytosol	39.66	58.51
TraesCS1A01G185300.2	Wheat	cytosol	39.56	58.45
Os10t0533000-01	Rice	extracellular	39.77	58.31
Zm00001d029719_P002	Maize	cytosol	39.03	58.22
Os03t0126100-01	Rice	cytosol	26.76	58.09
TraesCS1D01G191600.1	Wheat	cytosol	39.35	58.05
TraesCS1B01G193200.1	Wheat	cytosol	39.14	57.83
OQU92250	Sorghum	mitochondrion	39.87	53.0
GSMUA_Achr5P10290_001	Banana	nucleus	18.68	51.0
GSMUA_Achr1P03730_001	Banana	mitochondrion, nucleus, plastid	26.23	45.62
HORVU4Hr1G083270.5	Barley	mitochondrion	28.23	43.6
GSMUA_Achr2P11860_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	10.18	40.76

Protein Annotations

EnsemblPlants:CDY15172	EnsemblPlantsGene:GSBRNA2T00085352001	Gene3D:3.40.50.720	GO:A0A078FQP2	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43254	PFAM:PF02826	ProteinID:CDY15172	ProteinID:CDY15172.1	SEG:seg
SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EF40A2	UniProt:A0A078FQP2	MapMan:35.1	:

Description

BnaC05g00510DBnaC05g00510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQP2]

Coordinates

chrLK032052:-:289023..293716

Molecular Weight (calculated)

104908.0 Da

IEP (calculated)

6.616

GRAVY (calculated)

-0.265

Length

953 amino acids

Sequence
(BLAST)

001: MISRDHHHHH PDPLGTSSKS FHMKASAVAA SPASVQLSQS AWLEVRLFYV RIAPCFVENV PDSLTLRHPR RETGASLEVN GVRVPPLQTA SLKLRRDRVD
101: RESSEVTYVS TEAVRVTGCV DFEVYDKEEM VLCGNLDRIE GAWSNNGTVS DAKTGWGMDC YVAMRNGSGS SSSSAFFRPK LGVSSPSVEV YIAGCCGGVP
201: VILTKTIQAS PRRKVARHVT LDAIPEDEEQ GVVTTGDDEF PRQQKMMESE VDDESEMKMR YYPEGMYVDE DGQLSWFNAG VRVGVGIGLG MCLGVGIGVG
301: LLMRSYHATT SNLRRRCPLV LGSSSEKMSK IRPSATMPHR DQPSPLIVTL NCVEDCALEQ DSLAGVAGVE YVPLSRIADG KIESATAVLL HSLAYLPRAA
401: QRRLRPHQLI LCLGSADRAV DSTLAADLGL RLVHVDTSRA EEIADTVMAL ILGLLRRTHL LSRHALSASG WLGSLQPLCR GMRRCRGMVL GIIGRSVSAR
501: YLASRSLAFK MSVLYFDVPE GDEGRIRPSR FPRAARRMDT LNDLLAASDV ISLHCALTDN TVQILNAECL QHIKPGAFLV NTGSCQLLDD CAVKQLLIDG
601: TIAGCAIDGA EGPQWMEAWV KEMPNVLILP RSADYSEEVW MEIREKAISI LQSFFLDGVI PTNTVSDEES EASEEEEEEV SPIRHGKLAL VESTSRQQQG
701: ESTLTSTEIV PIEASEFKES LSPGQNTAIK PEVRRSRSGK KAKKRHSQQK HMQRAEGSSG LHEESSTSRR EDIAMSDSEE VLSSSSRCVS PEDSRSRKTP
801: LEVMQQNQLV RSSKKFIGKS SELLKDGYVI AMYAKDLSGL HVSRQRTKNG GWFLDTLSNV SKRDPAAQFI IAYRNKDTVG LRSFAAGGKL LQINRRMEFV
901: FASHSFDVWE SWSLEGSLDE CRLVNCRNAS ASLEVRVEIL AMVGDDGVTR WID

Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)

001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID

Arabidopsis Description

ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.