Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G193200.1 | Wheat | cytosol | 97.99 | 98.14 |
| HORVU1Hr1G049460.1 | Barley | cytosol | 97.83 | 97.83 |
| TraesCS1A01G185300.2 | Wheat | cytosol | 97.68 | 97.83 |
| Os10t0533000-01 | Rice | extracellular | 85.29 | 84.77 |
| Zm00001d029719_P002 | Maize | cytosol | 83.75 | 84.66 |
| VIT_03s0088g00460.t01 | Wine grape | cytosol | 9.6 | 78.48 |
| TraesCS4D01G315500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 76.16 | 77.0 |
| OQU92250 | Sorghum | mitochondrion | 83.59 | 75.31 |
| GSMUA_Achr5P13770_001 | Banana | mitochondrion | 53.56 | 67.18 |
| GSMUA_Achr5P10300_001 | Banana | cytosol | 36.22 | 66.48 |
| VIT_15s0046g02250.t01 | Wine grape | cytosol, plastid | 64.71 | 64.91 |
| KRH40381 | Soybean | endoplasmic reticulum | 61.3 | 64.18 |
| KRH00851 | Soybean | endoplasmic reticulum | 61.15 | 64.02 |
| GSMUA_Achr5P10290_001 | Banana | nucleus | 34.06 | 63.04 |
| PGSC0003DMT400000547 | Potato | cytosol | 61.15 | 62.6 |
| Solyc01g095040.2.1 | Tomato | nucleus | 60.99 | 62.44 |
| AT1G01510.1 | Thale cress | cytosol | 60.06 | 61.01 |
| Bra033258.1-P | Field mustard | cytosol, peroxisome, plastid | 58.2 | 59.59 |
| CDX90038 | Canola | mitochondrion, plastid | 58.36 | 58.0 |
| GSMUA_Achr1P03730_001 | Banana | mitochondrion, nucleus, plastid | 44.58 | 52.55 |
| GSMUA_Achr2P11860_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 16.87 | 45.8 |
| CDY15172 | Canola | plastid | 58.05 | 39.35 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G191600.1 | EnsemblPlantsGene:TraesCS1D01G191600 | Gene3D:3.40.50.720 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0051287 | GO:GO:0055114 | InterPro:D-isomer_DH_NAD-bd | InterPro:NAD(P)-bd_dom_sf |
| PANTHER:PTHR43254 | PFAM:PF02826 | SEG:seg | SUPFAM:SSF51735 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:+:267375804..267379793
Molecular Weight (calculated)
70042.5 Da
IEP (calculated)
6.741
GRAVY (calculated)
-0.204
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRSPAHSVP AAAAAAGGGG GQPLVVTLNC LEDPSVERDA LAGAAAVEHA PLSALASGHV EAAAAVLLTS LAFLPRAAQR RLRPWQLLLC LGSPDRAADA
101: AAAAELGLRL VHVDANRAEE IADTVMALFL GLLRRTHLLS GHASSSTPSA GWLGSVQPLC RGMRRCRGLV LGIVGVNAAA RCLATRSLAF RMSVLYFDPL
201: YEGAGKTKRP SIVFPSSARR MDTLNDLLAA SDLVSLHCAL TNDTTNIISA ERLQHIKPGA FIVNTSSCQL IDDCALKQLL LDGTIAGCAL DGAEGPQWME
301: AWVHEMPNVL ILPRSADYSE EVWMEIREKA ITILQSFFFD GIVPNNAISD EDEAISDVGC EDDQLYKQAN EHSLRGCDGE QQTDESRLTL ECDKRRAISK
401: PEVPEASGQS QSIGLRSEGR RSRSGKKGKK RPARRRSQQK MDELSTVESG SNYSSRRDDD TVMSGRDQVL SSSSRFASPE ESKNKLRSSA ESPMEIISEH
501: KLPAGLGRKP PERLKDGFVV ALRSRDNSGF HVSRERVAGG GWYLDVVSNA TKRDPAAQFL ITFKNKVDTM GLRSFVAGGK LLQVNKKAEL VFANHAFDVW
601: ESWTLEGSLL ECCKLINHRN PLAVLEVYIE ILAAVSEEDG VTRWLD
101: AAAAELGLRL VHVDANRAEE IADTVMALFL GLLRRTHLLS GHASSSTPSA GWLGSVQPLC RGMRRCRGLV LGIVGVNAAA RCLATRSLAF RMSVLYFDPL
201: YEGAGKTKRP SIVFPSSARR MDTLNDLLAA SDLVSLHCAL TNDTTNIISA ERLQHIKPGA FIVNTSSCQL IDDCALKQLL LDGTIAGCAL DGAEGPQWME
301: AWVHEMPNVL ILPRSADYSE EVWMEIREKA ITILQSFFFD GIVPNNAISD EDEAISDVGC EDDQLYKQAN EHSLRGCDGE QQTDESRLTL ECDKRRAISK
401: PEVPEASGQS QSIGLRSEGR RSRSGKKGKK RPARRRSQQK MDELSTVESG SNYSSRRDDD TVMSGRDQVL SSSSRFASPE ESKNKLRSSA ESPMEIISEH
501: KLPAGLGRKP PERLKDGFVV ALRSRDNSGF HVSRERVAGG GWYLDVVSNA TKRDPAAQFL ITFKNKVDTM GLRSFVAGGK LLQVNKKAEL VFANHAFDVW
601: ESWTLEGSLL ECCKLINHRN PLAVLEVYIE ILAAVSEEDG VTRWLD
001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID
Arabidopsis Description
ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.