Factsheet for TraesCS4D01G315500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G185300.2
TraesCS1B01G193200.1
TraesCS1D01G191600.1
TraesCS2A01G218900.1
TraesCS2B01G244300.1
TraesCS2D01G224500.1
TraesCS4B01G319000.1
TraesCS4D01G315500.1
TraesCS5A01G493200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01510.1	TraesCS1A01G185300.2	AT1G01510.1	11889033
AT1G01510.1	TraesCS1B01G193200.1	AT1G01510.1	11889033
AT1G01510.1	TraesCS1D01G191600.1	AT1G01510.1	11889033
AT1G01510.1	TraesCS4B01G319000.1	AT1G01510.1	11889033
AT1G01510.1	TraesCS4D01G315500.1	AT1G01510.1	11889033
AT1G01510.1	TraesCS5A01G493200.1	AT1G01510.1	11889033
AT1G01510.1	TraesCS1A01G185300.2	AT1G01510.1	17972097
AT1G01510.1	TraesCS1B01G193200.1	AT1G01510.1	17972097
AT1G01510.1	TraesCS1D01G191600.1	AT1G01510.1	17972097
AT1G01510.1	TraesCS4B01G319000.1	AT1G01510.1	17972097
AT1G01510.1	TraesCS4D01G315500.1	AT1G01510.1	17972097
AT1G01510.1	TraesCS5A01G493200.1	AT1G01510.1	17972097
AT1G01510.1	TraesCS1A01G185300.2	AT1G01510.1	21798944
AT1G01510.1	TraesCS1B01G193200.1	AT1G01510.1	21798944
AT1G01510.1	TraesCS1D01G191600.1	AT1G01510.1	21798944
AT1G01510.1	TraesCS4B01G319000.1	AT1G01510.1	21798944
AT1G01510.1	TraesCS4D01G315500.1	AT1G01510.1	21798944
AT1G01510.1	TraesCS5A01G493200.1	AT1G01510.1	21798944
AT1G01510.1	TraesCS2A01G218900.1	AT5G15170.1	21798944
AT1G01510.1	TraesCS2B01G244300.1	AT5G15170.1	21798944
AT1G01510.1	TraesCS2D01G224500.1	AT5G15170.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G319000.1	Wheat	mitochondrion	80.44	98.09
TraesCS5A01G493200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	97.18	97.18
Os03t0126100-01	Rice	cytosol	59.62	86.79
Zm00001d027450_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	82.94	82.43
VIT_03s0088g00460.t01	Wine grape	cytosol	10.17	82.28
TraesCS1D01G191600.1	Wheat	cytosol	77.0	76.16
HORVU4Hr1G083270.5	Barley	mitochondrion	69.17	71.64
GSMUA_Achr5P10300_001	Banana	cytosol	38.65	70.17
GSMUA_Achr5P13770_001	Banana	mitochondrion	54.46	67.57
VIT_15s0046g02250.t01	Wine grape	cytosol, plastid	66.82	66.3
GSMUA_Achr5P10290_001	Banana	nucleus	35.84	65.62
KRH00851	Soybean	endoplasmic reticulum	62.75	64.99
KRH40381	Soybean	endoplasmic reticulum	62.44	64.67
PGSC0003DMT400000547	Potato	cytosol	62.91	63.71
Solyc01g095040.2.1	Tomato	nucleus	62.75	63.55
AT1G01510.1	Thale cress	cytosol	62.44	62.74
Bra033258.1-P	Field mustard	cytosol, peroxisome, plastid	60.09	60.86
CDX90038	Canola	mitochondrion, plastid	60.09	59.08
GSMUA_Achr1P03730_001	Banana	mitochondrion, nucleus, plastid	45.54	53.1
GSMUA_Achr2P11860_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	16.59	44.54
CDY15172	Canola	plastid	59.62	39.98

Protein Annotations

EnsemblPlants:TraesCS4D01G315500.1	EnsemblPlantsGene:TraesCS4D01G315500	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR43254	PFAM:PF02826	SEG:seg	SUPFAM:SSF51735	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:-:481137892..481141377

Molecular Weight (calculated)

69609.7 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.255

Length

639 amino acids

Sequence
(BLAST)

001: MAHSPAGAAA GLPLVVSLNC LDDPSPEREL LAGVAGVEHV SLSAVGSGRV ESAAAVLLPS LAYLPRAAQR RLRPWQLLLC LGSPDRAADA AAAADLGLRL
101: VHVDANRAEE VADTVMALFL GLLRRTHLLS RHVSSSPAAV AAGCLGAVQP LCRGMRRCRG LVLGIVGRSA AARCLATRSL AFRMSVLYFD PRYLAEGKMR
201: RPSIVFPAAA RRMDTLNDLL AASDLVSLHC TLTNDTMHIL NGDCLQHIKP GAFIVNTGSC QLIDDCALKQ LLLDGTIAGC ALDGVEGPQW MEAWVREMPN
301: VLILPRSADY SEEVWMEIRE KAITILQSFF FDGVVPSSSI SDEDEEISEA GNEDDQDRGT KDNHSQVFDG EDQTDESHLT LNYEKKRVTS QHKDYQAPGQ
401: SSQNSVSRTE GRRSRSGKKG KKRPAHRRSQ KTDDLSAVES DSNYSFRRDD DNATSGRDQV VSSSSRFASP EDSKYKQKSP AESPMEITSE KKLPVMLGRK
501: CPDTLKDGYV VALRAKDNSG FHVARQRLAG GGGWILDVVS NATNRDPAAQ FLVTFKNKDL MGLRSFVAGG KLLQINRKME FVFASHSFDV WEGWVLEVEG
601: SWLEGCKLIN CRNSSAVLDV SIEVLAAASE EDGVTRWLD

Best Arabidopsis Sequence Match ( AT1G01510.1 )
(BLAST)

001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID

Arabidopsis Description

ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.