Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G193200.1 | Wheat | cytosol | 98.45 | 98.45 |
| HORVU1Hr1G049460.1 | Barley | cytosol | 97.98 | 97.83 |
| TraesCS1D01G191600.1 | Wheat | cytosol | 97.83 | 97.68 |
| Zm00001d029719_P002 | Maize | cytosol | 83.72 | 84.51 |
| Os10t0533000-01 | Rice | extracellular | 85.12 | 84.46 |
| VIT_03s0088g00460.t01 | Wine grape | cytosol | 9.61 | 78.48 |
| TraesCS5A01G493200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 75.81 | 76.53 |
| OQU92250 | Sorghum | mitochondrion | 83.72 | 75.31 |
| GSMUA_Achr5P13770_001 | Banana | mitochondrion | 53.64 | 67.18 |
| GSMUA_Achr5P10300_001 | Banana | cytosol | 35.97 | 65.91 |
| VIT_15s0046g02250.t01 | Wine grape | cytosol, plastid | 64.81 | 64.91 |
| KRH40381 | Soybean | endoplasmic reticulum | 61.55 | 64.34 |
| KRH00851 | Soybean | endoplasmic reticulum | 61.4 | 64.18 |
| GSMUA_Achr5P10290_001 | Banana | nucleus | 34.42 | 63.61 |
| PGSC0003DMT400000547 | Potato | cytosol | 61.4 | 62.76 |
| Solyc01g095040.2.1 | Tomato | nucleus | 61.24 | 62.6 |
| AT1G01510.1 | Thale cress | cytosol | 60.31 | 61.16 |
| Bra033258.1-P | Field mustard | cytosol, peroxisome, plastid | 58.6 | 59.9 |
| CDX90038 | Canola | mitochondrion, plastid | 58.76 | 58.31 |
| GSMUA_Achr1P03730_001 | Banana | mitochondrion, nucleus, plastid | 44.5 | 52.37 |
| GSMUA_Achr2P11860_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 17.05 | 46.22 |
| CDY15172 | Canola | plastid | 58.45 | 39.56 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G185300.2 | EnsemblPlantsGene:TraesCS1A01G185300 | Gene3D:3.40.50.720 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0051287 | GO:GO:0055114 | InterPro:D-isomer_DH_NAD-bd | InterPro:NAD(P)-bd_dom_sf |
| PANTHER:PTHR43254 | PFAM:PF02826 | SEG:seg | SUPFAM:SSF51735 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1A:-:335831818..335836083
Molecular Weight (calculated)
70056.5 Da
IEP (calculated)
6.625
GRAVY (calculated)
-0.197
Length
645 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRGPAHPVP ATAATAAGSG QPLVVTLNCL EDPSVERDAL AGAAAVEHAP LSALASGHVE AAAAVLLTSL AFLPRAAQRR LRPWQLLLCL GSPDRAADAA
101: AAAELGLRLV HVDANRAEEI ADTVMALFLG LLRRTHLLSG HASSSTPSAG WLGSVQPLCR GMRRCRGLVL GIVGVNAAAR CLATRSLAFR MSVLYFDPLY
201: EGVGKTKRPS IVFPSSARRM DTLNDLLAAS DLVSLHCALT NDTTNIISAE RLQHIKPGAF IVNTSSCQLI DDCALKQLLL DGTIAGCALD GAEGPQWMEA
301: WVHEMPNVLI LPRSADYSEE VWMEIREKAI TILQSFFFDG IVPNNAISDE DEAISDVGCE DDQLYKQANE HSLRVCDGEQ QTDESQLTLE CDKRRAISKP
401: EVPEASGQSQ SIGLRSEGRR SRSGKKGKKR PARRRSQQKM DELSTVESGS NYSSRRDDDT VMSGRDQVLS SSSRFASPEE SKNKLRSSAE SPMEIISEHK
501: LPAGLGRKPP ERLKDGFVVA LRTRDNSGFH VSRERVAGGG WYLDVVSNAT KRDPAAQFLI TFKNKVDTMG LRSFVAGGKL LQVNKKAELV FASHAFDVWE
601: SWTLEGSLLE CCKLVNHRNP LAALEVYIEI LAAVSEEDGV TRWLD
101: AAAELGLRLV HVDANRAEEI ADTVMALFLG LLRRTHLLSG HASSSTPSAG WLGSVQPLCR GMRRCRGLVL GIVGVNAAAR CLATRSLAFR MSVLYFDPLY
201: EGVGKTKRPS IVFPSSARRM DTLNDLLAAS DLVSLHCALT NDTTNIISAE RLQHIKPGAF IVNTSSCQLI DDCALKQLLL DGTIAGCALD GAEGPQWMEA
301: WVHEMPNVLI LPRSADYSEE VWMEIREKAI TILQSFFFDG IVPNNAISDE DEAISDVGCE DDQLYKQANE HSLRVCDGEQ QTDESQLTLE CDKRRAISKP
401: EVPEASGQSQ SIGLRSEGRR SRSGKKGKKR PARRRSQQKM DELSTVESGS NYSSRRDDDT VMSGRDQVLS SSSRFASPEE SKNKLRSSAE SPMEIISEHK
501: LPAGLGRKPP ERLKDGFVVA LRTRDNSGFH VSRERVAGGG WYLDVVSNAT KRDPAAQFLI TFKNKVDTMG LRSFVAGGKL LQVNKKAELV FASHAFDVWE
601: SWTLEGSLLE CCKLVNHRNP LAALEVYIEI LAAVSEEDGV TRWLD
001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID
Arabidopsis Description
ANC-terminal binding protein AN [Source:UniProtKB/Swiss-Prot;Acc:O23702]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.