Factsheet for GSMUA_Achr7P22470_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011971_P001	Maize	mitochondrion, peroxisome	64.01	64.24
KXG34022	Sorghum	peroxisome	64.71	63.61
TraesCS3D01G430300.1	Wheat	peroxisome	62.63	62.41
TraesCS3B01G472000.1	Wheat	peroxisome	62.63	62.41
TraesCS3A01G438000.1	Wheat	peroxisome	62.63	62.41
Os01t0925200-01	Rice	nucleus, plasma membrane	62.63	62.2
TraesCS3A01G438100.1	Wheat	peroxisome	62.28	62.07
TraesCS3D01G430400.2	Wheat	peroxisome	60.9	60.69
VIT_01s0146g00270.t01	Wine grape	peroxisome	55.02	57.82
KRH66641	Soybean	peroxisome	53.29	56.41
Bra027479.1-P	Field mustard	peroxisome	52.94	55.43
CDY32958	Canola	peroxisome	52.6	55.07
AT5G43280.1	Thale cress	peroxisome	52.94	55.04
CDY43605	Canola	peroxisome	52.25	54.71
Solyc05g024240.2.1	Tomato	nucleus	40.14	50.0
GSMUA_Achr5P18330_001	Banana	mitochondrion	27.34	25.32
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	20.42	22.43
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	19.72	21.59
GSMUA_Achr4P07800_001	Banana	mitochondrion	21.8	18.81
GSMUA_Achr4P07830_001	Banana	cytosol, mitochondrion, peroxisome	11.07	16.08
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	23.18	9.36
GSMUA_Achr8P19760_001	Banana	peroxisome	23.53	9.3
GSMUA_Achr2P01720_001	Banana	peroxisome	20.42	8.19
GSMUA_Achr7P14420_001	Banana	peroxisome	20.42	8.14
GSMUA_Achr9P20010_001	Banana	peroxisome	2.42	2.35

Protein Annotations

Gene3D:1.10.12.10	Gene3D:3.90.226.10	MapMan:5.7.3.5.2	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0051750	EnsemblPlantsGene:GSMUA_Achr7G22470_001	EnsemblPlants:GSMUA_Achr7P22470_001
EnsemblPlants:GSMUA_Achr7T22470_001	InterPro:IPR014748	UniProt:M0TJT3	PFAM:PF00378	PANTHER:PTHR43149	PANTHER:PTHR43149:SF1
SUPFAM:SSF52096	UniParc:UPI000295E4A9	SEG:seg	:	:	:

Description

Putative Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr7G22470_001]

Coordinates

chr7:+:24956496..24957655

Molecular Weight (calculated)

30646.2 Da

IEP (calculated)

7.794

GRAVY (calculated)

0.153

Length

289 amino acids

Sequence
(BLAST)

001: MAEDDVTGAA AEAELKKGFE TLEVVQPDPS VPVHYIYLNR PAQRNALTPA FFTDLPRALA LLDRLPSARA IVLAARGPHF CAGIDLSTLA ATSSPRSADR
101: AAASELLRRR IIALQATISA VERCRKPVVA AIHGACIGGG VDLVAACDIR CCDEGAFFAV KEVDLALAAD LGSLQRLPSI VGYGNAADMA LTGRGVPAAE
201: AKAMGLVTRV FPSRAAMEEG VAAIARGLAE KSTVAMMGTK AVMLRSRDLT VDQGLEYVAT WNSAMLMSRD LEEALRAQLE KRKPNFSRL

Best Arabidopsis Sequence Match ( AT5G43280.1 )
(BLAST)

001: MTMESYKTLE IIRKNTDSSV FHLIINRPSH LNALSLDFFI EFPKALSSLD QNPDVSVIIL SGAGKHFCSG IDLNSLSSIS TQSSSGNDRG RSSEQLRRKI
101: KSMQAAITAI EQCRKPVIAA IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL TARRFSGSEA KDLGLVSKVF
201: GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL

Arabidopsis Description

DCI1Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHR8]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.