Factsheet for GSMUA_Achr3P24070_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P01720_001	Banana	peroxisome	71.09	70.69
VIT_05s0077g02140.t01	Wine grape	peroxisome	65.78	65.06
Solyc12g099440.1.1	Tomato	nucleus	64.39	63.41
PGSC0003DMT400011792	Potato	peroxisome	64.25	63.27
KRH50818	Soybean	nucleus	63.41	62.71
KRH02269	Soybean	peroxisome	62.57	61.96
KRH02268	Soybean	nucleus	62.01	61.5
CDY08028	Canola	peroxisome	62.15	61.29
CDX74076	Canola	peroxisome	62.01	61.16
Zm00001d037939_P003	Maize	peroxisome	61.31	61.14
AT3G06860.1	Thale cress	peroxisome	61.87	61.1
CDY34924	Canola	peroxisome	62.01	61.07
TraesCS1A01G231100.1	Wheat	peroxisome	61.31	61.06
Bra001221.1-P	Field mustard	peroxisome	61.73	60.97
EES18080	Sorghum	peroxisome	61.03	60.86
Bra040296.1-P	Field mustard	peroxisome	61.59	60.83
CDY24662	Canola	peroxisome	61.03	60.19
HORVU1Hr1G058880.12	Barley	peroxisome	60.34	60.17
TraesCS1D01G231000.1	Wheat	golgi, peroxisome, unclear	60.34	60.08
Bra029608.1-P	Field mustard	peroxisome	60.75	60.0
PGSC0003DMT400029427	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	23.6	59.93
CDY05296	Canola	peroxisome	60.47	59.72
KRH50819	Soybean	cytosol, extracellular, peroxisome	6.01	59.72
TraesCS1B01G243300.1	Wheat	peroxisome	57.68	59.42
Solyc01g066620.2.1	Tomato	plastid	58.52	58.77
KRH25463	Soybean	extracellular	6.84	57.65
Os05t0362100-01	Rice	cytosol, mitochondrion, peroxisome	37.43	57.63
GSMUA_Achr7P14420_001	Banana	peroxisome	52.51	51.86
PGSC0003DMT400046197	Potato	cytosol	20.67	51.57
Solyc06g009160.2.1	Tomato	cytosol	52.37	51.23
GSMUA_Achr8P19760_001	Banana	peroxisome	52.09	51.03
KRG94502	Soybean	peroxisome	15.78	48.71
GSMUA_Achr9P20010_001	Banana	peroxisome	10.47	25.17
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	9.22	25.1
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	9.08	24.62
GSMUA_Achr5P18330_001	Banana	mitochondrion	10.2	23.4
GSMUA_Achr7P22470_001	Banana	peroxisome	9.36	23.18
GSMUA_Achr4P07800_001	Banana	mitochondrion	9.5	20.3
GSMUA_Achr4P07830_001	Banana	cytosol, mitochondrion, peroxisome	3.63	13.07

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35	KEGG:00281+4.2.1.17+1.1.1.35	KEGG:00310+4.2.1.17+1.1.1.35
KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17	KEGG:00592+4.2.1.17	KEGG:00623+1.1.1.35
KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00720+4.2.1.17+1.1.1.35	KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35
Gene3D:1.10.1040.50	InterPro:3-OHacyl-CoA_DH_NAD-bd	Gene3D:3.40.50.720	Gene3D:3.90.226.10	InterPro:3HC_DH_C	MapMan:5.7.3.2.2
InterPro:6-PGluconate_DH-like_C_sf	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824	GO:GO:0003857
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G24070_001	EnsemblPlants:GSMUA_Achr3P24070_001	EnsemblPlants:GSMUA_Achr3T24070_001	UniProt:M0SHC3	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00378	PFAM:PF00725	PFAM:PF02737	PANTHER:PTHR23309	PANTHER:PTHR23309:SF23	SUPFAM:SSF48179
SUPFAM:SSF51735	SUPFAM:SSF52096	UniParc:UPI000294C2F4	SEG:seg	:	:

Description

Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Source:GMGC_GENE;Acc:GSMUA_Achr3G24070_001]

Coordinates

chr3:-:24728781..24733467

Molecular Weight (calculated)

78295.7 Da

IEP (calculated)

5.231

GRAVY (calculated)

-0.075

Length

716 amino acids

Sequence
(BLAST)

001: MEKKMARTEM EVGADGVAVI TIINPPINCL SFDVMWSLKA NFEEAIRRDD VKAIVLTGQG PNFSGGFDIA AFEDLQGGNN GQKPEPKVGY FAIDVVTDIF
101: EAARKPSVAA ITGLVIGGGL ELSMACHGRI STAAAQIALP ELTLGFITGL GGTQRLPRLV GLPKALEMLL LSKGIGGEEA YKLGLVDAIV SPDELVETAR
201: HWALDIAESR KPWTKSLYRT DKLEPPEKAR EVLKSARVEA RKRSPNVQFP SLCIDVIEEG IVSGPRAGLW KESTTFLELL FTDTCKNLVH LLFAQRATTK
301: VPGITDSGLK PRKIATVGIV GGGLTSSGIA TALILNNYQV ILKEEDENLL ESTIGRVKDN LQNCVNEGKL NDEKCETALS LLTGVLDYER FKDSASENLH
401: LKQQIFADLE KHCSPNCILA SNTSTIDLNL IGGETKSQDR IVGAHFFGPA HDMPLLEIIQ TQKTSPQAVV DLLDVAEKIH KTPIVVRNCT GFAVNRMLFA
501: HTQAALLLVD HGLDVYKIDH ACTKFGLPMG PFRAADLVGL GAAGASGIQY LQSYPERVYK SMLMSVMIED KREGEASGKG FYKYDEKRNA SPDPEIIKYV
601: EKSRNMASVT PNPQLMEIPD EDIVEMLLFP VINEACRILD EGIAVKATDL DIATVMGMGF PAYRGGIMFW ADSLGANYIC EKLEEWSKLY GNLFKPCSYL
701: TDRAAKGILL RERERD

Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)

001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL

Arabidopsis Description

MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.