Factsheet for Solyc01g066620.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
peroxisome 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029427	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	36.89	93.26
Solyc12g099440.1.1	Tomato	nucleus	73.63	72.21
VIT_05s0077g02140.t01	Wine grape	peroxisome	70.41	69.34
KRH50818	Soybean	nucleus	69.42	68.37
KRH02269	Soybean	peroxisome	68.72	67.77
KRH02268	Soybean	nucleus	67.6	66.76
CDY24662	Canola	peroxisome	67.32	66.12
AT3G06860.1	Thale cress	peroxisome	67.18	66.07
Bra029608.1-P	Field mustard	peroxisome	67.04	65.93
CDX74076	Canola	peroxisome	67.04	65.84
CDY05296	Canola	peroxisome	66.9	65.79
CDY08028	Canola	peroxisome	66.76	65.56
Bra001221.1-P	Field mustard	peroxisome	66.62	65.52
Bra040296.1-P	Field mustard	peroxisome	66.48	65.38
CDY34924	Canola	peroxisome	66.62	65.34
GSMUA_Achr2P01720_001	Banana	peroxisome	64.94	64.31
TraesCS1B01G243300.1	Wheat	peroxisome	58.91	60.43
TraesCS1D01G231000.1	Wheat	golgi, peroxisome, unclear	59.47	58.97
TraesCS1A01G231100.1	Wheat	peroxisome	59.33	58.83
EES18080	Sorghum	peroxisome	59.19	58.77
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	58.77	58.52
Zm00001d037939_P003	Maize	peroxisome	58.91	58.5
HORVU1Hr1G058880.12	Barley	peroxisome	58.77	58.36
Os05t0362100-01	Rice	cytosol, mitochondrion, peroxisome	36.04	55.27
KRG94502	Soybean	peroxisome	17.39	53.45
Solyc12g007170.1.1	Tomato	plastid	52.45	51.66
Solyc07g019670.2.1	Tomato	plastid	51.61	50.9
Solyc06g009160.2.1	Tomato	cytosol	52.17	50.82
Solyc08g068390.2.1	Tomato	peroxisome	47.55	47.75
Solyc07g063010.2.1	Tomato	nucleus	11.22	27.03
Solyc08g078130.2.1	Tomato	mitochondrion	10.24	23.47
Solyc01g059830.2.1	Tomato	nucleus, plastid	8.27	22.26
Solyc05g024240.2.1	Tomato	nucleus	7.15	21.98
Solyc05g005180.2.1	Tomato	nucleus	7.43	15.73

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35	KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35	KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17	KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35	KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35	Gene3D:1.10.1040.50	InterPro:3-OHacyl-CoA_DH_CS	InterPro:3-OHacyl-CoA_DH_NAD-bd	Gene3D:3.40.50.720
Gene3D:3.90.226.10	InterPro:3HC_DH_C	MapMan:5.7.3.2.2	InterPro:6-PGluconate_DH-like_C_sf	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hyd/isom_CS
InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824	GO:GO:0003857	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631	GO:GO:0006635
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
UniProt:K4AWR3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00378	PFAM:PF00725	PFAM:PF02737	ScanProsite:PS00067
ScanProsite:PS00166	PANTHER:PTHR23309	PANTHER:PTHR23309:SF23	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52096
EnsemblPlantsGene:Solyc01g066620.2	EnsemblPlants:Solyc01g066620.2.1	UniParc:UPI0002762B5A	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:74760560..74766184

Molecular Weight (calculated)

78743.9 Da

IEP (calculated)

8.728

GRAVY (calculated)

0.090

Length

713 amino acids

Sequence
(BLAST)

001: MSVKLVDDVI TTLLITPTPI ILYSLKDAFE EALRRDDVKA IVVTGCHGKF SGGFNISSFV DLQQQKVAQP NPGYISLDIL TDIVEVSKKP LVAAIDGHAL
101: GGGLEIAMCC HARISTPNAK LGLPELHLGI IPGFGGTQRL PRLVGLAKSL EMMLTAKLVK GEEALDLGLV DAIVSSNQLL DTARKWALDI WEHKKPWNIA
201: SLYRTDKMES LGEAKEILKF ARAQALRIAP NLHHPLAFVD VVEEGIVSGP RAGLIKEYET FEVLIRSGPC KALVHIFFAQ RGTMRVPGVT DLGLVPRHIK
301: RVGILGGGLM GSGIATSFLL SNYHVILKEF NDKVLEAGIE RIKANLQSRI NKGKLSQEKF EKAVSLLIGT LDYESFRAID MVIEAVTEDL SLKKQIFMDL
401: EKYCPPHCIL ASNTSTIDLN LIVDEKSKYA DRIIGAHFFS PAHVMPLLEI VRTQNTSPQV IVDLLYVGKK IKKTPVVVRN CTGFAVNRML FPFTQAALLL
501: VEHGADLYSI DNAFTKFGMA MGPFRLFDLV GFNVAMASEA QFVSSMPGRI YKSMLVPLMQ QDKRLGETTR KGFYLYDERR KAKPDPDIKR YIEKAREISG
601: VSIDPKTAKL SEKDMVEMIL FPLVNEACRL LAEGIVVKAS DLDIASVMGI GFPPYRGGII YWADTVGSKY ICSRLDEWTT IYGKIFKPCD YLAEKAARGI
701: PLSGTMDPAK SRL

Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)

001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL

Arabidopsis Description

MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.