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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 5
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:plastid
EpiLoc:peroxisome
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:peroxisome
PProwler:peroxisome
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037939_P003 Maize peroxisome 92.48 92.48
TraesCS1D01G231000.1 Wheat golgi, peroxisome, unclear 80.92 80.81
TraesCS1A01G231100.1 Wheat peroxisome 80.92 80.81
TraesCS1B01G243300.1 Wheat peroxisome 77.72 80.29
HORVU1Hr1G058880.12 Barley peroxisome 79.67 79.67
Os05t0362100-01 Rice cytosol, mitochondrion, peroxisome 49.58 76.56
GSMUA_Achr2P01720_001 Banana peroxisome 68.52 68.33
KXG32465 Sorghum peroxisome 67.41 66.94
KRH50818 Soybean nucleus 67.41 66.85
VIT_05s0077g02140.t01 Wine grape peroxisome 67.27 66.71
PGSC0003DMT400011792 Potato peroxisome 67.13 66.3
Solyc12g099440.1.1 Tomato nucleus 66.99 66.16
KRH02269 Soybean peroxisome 66.57 66.11
KRH02268 Soybean nucleus 66.16 65.79
AT3G06860.1 Thale cress peroxisome 65.88 65.24
CDY24662 Canola peroxisome 65.46 64.74
Bra040296.1-P Field mustard peroxisome 65.32 64.69
Bra029608.1-P Field mustard peroxisome 65.32 64.69
CDY34924 Canola peroxisome 65.46 64.65
Bra001221.1-P Field mustard peroxisome 65.18 64.55
CDY05296 Canola peroxisome 65.18 64.55
CDX74076 Canola peroxisome 65.18 64.46
CDY08028 Canola peroxisome 65.04 64.33
KRH50819 Soybean cytosol, extracellular, peroxisome 6.41 63.89
KRH25463 Soybean extracellular 7.52 63.53
GSMUA_Achr3P24070_001 Banana cytosol, peroxisome, plastid 60.86 61.03
PGSC0003DMT400029427 Potato endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 23.82 60.64
Solyc01g066620.2.1 Tomato plastid 58.77 59.19
EES04919 Sorghum peroxisome 56.27 55.57
KRG94502 Soybean peroxisome 16.99 52.59
Solyc06g009160.2.1 Tomato cytosol 51.81 50.82
PGSC0003DMT400046197 Potato cytosol 19.92 49.83
EES01597 Sorghum peroxisome, plasma membrane 11.28 27.09
OQU85737 Sorghum mitochondrion 10.45 24.59
KXG34022 Sorghum peroxisome 10.03 24.49
OQU85735 Sorghum mitochondrion 9.89 23.51
EER94969 Sorghum peroxisome, plastid 8.5 22.76
EES06293 Sorghum plastid 8.91 18.93
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35KEGG:00310+4.2.1.17+1.1.1.35
KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17KEGG:00623+1.1.1.35
KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35
Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720Gene3D:3.90.226.10InterPro:3HC_DH_CMapMan:5.7.3.2.2
InterPro:6-PGluconate_DH-like_C_sfEntrezGene:8061917UniProt:C5YWU1InterPro:ClpP/crotonase-like_dom_sfEnsemblPlants:EES18080ProteinID:EES18080
ProteinID:EES18080.1InterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoGO:GO:0003674GO:GO:0003824GO:GO:0003857
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0006629
GO:GO:0006631GO:GO:0006635GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016491GO:GO:0055114InterPro:NAD(P)-bd_dom_sfProteinID:OQU77847.1PFAM:PF00378PFAM:PF00725
PFAM:PF02737ScanProsite:PS00166PANTHER:PTHR23309PANTHER:PTHR23309:SF23MetaCyc:PWY-1361MetaCyc:PWY-5109
MetaCyc:PWY-5136MetaCyc:PWY-5138MetaCyc:PWY-5177MetaCyc:PWY-5789MetaCyc:PWY-6435MetaCyc:PWY-6583
MetaCyc:PWY-6863MetaCyc:PWY-6883MetaCyc:PWY-6944MetaCyc:PWY-6945MetaCyc:PWY-6946MetaCyc:PWY-7007
MetaCyc:PWY-7046MetaCyc:PWY-7094MetaCyc:PWY-7216MetaCyc:PWY-735MetaCyc:PWY-7401MetaCyc:PWY-7606
MetaCyc:PWY-7654MetaCyc:PWY-7656MetaCyc:PWY-7726MetaCyc:PWY-7778MetaCyc:PWY-7779MetaCyc:PWY-81
EnsemblPlantsGene:SORBI_3009G111400SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52096unigene:Sbi.10781UniParc:UPI0001A88CB1
RefSeq:XP_002439650.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr9:+:44791313..44800404
Molecular Weight (calculated)
78878.4 Da
IEP (calculated)
8.744
GRAVY (calculated)
0.018
Length
718 amino acids
Sequence
(BLAST)
001: MARGTTTMEV RADGVAVITI SNPPVNALSL DVIASLQRNY TEALSRNDIK AIVLTGAKGR FCGGFDISAF GKKPKNEKPG SMSIDFLTDI VEDAHKPSVA
101: AIDGIALGGG LELAMVCHAR ISTPSAQLGL PELQLGIIPG LGGTQRLPRL VGLPKAIEMM LMSKTIKGMG AQELGLVDAV TSANELVNAA CSWALEIVEK
201: KKPWFRSLHR TDKLPDLAEV KDVLKFARVQ AKMKGANVQH PIVCIDVIEE GIVSGPRAGL MKETLSGKML EQSQTSKSLR HFFFAQRATS KIPNITNMGL
301: TARKIKKAAI IGGGLMGSGI ATILILNNFS VVLKEVNEEF LSTGINRIKA NLQSFVKKGQ LAIEDYKKKL SLLCGVLDYE QFRDTDVVIE AVIEDMFLKQ
401: QIFSDLEKYC HHNCIFATNT STIDLNIIGE KTASQDRIVG AHFFSPAHVM PLLEIVCTHH TSSQVIVDLL DLAKKIQKTP IVVGNCTGFA VNRMFFPYAQ
501: AACFLVDHGL DVYHTDHVIT QFGMPMGPFR LADLVGFGVA IATRKQYYQS YPGRCYKSMI LQILVEDNRT GESSRKGFYV YDNKRKASRD PDLGKYIEKS
601: RNMAGVMQDP KLMKLTDNDI VEMIFFPVVN EACRVLDEGI ALKASDLDVA SIMGMGFPSY RGGLMFWADS LGAKYVYDRL DAWSKDYGEF FRPCEYLAVR
701: ARQGVSLAAK VDGVKSRL
Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)
001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL
Arabidopsis Description
MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.