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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, unclear

Predictor Summary:
  • peroxisome 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, unclear
Any Predictor:peroxisome
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:peroxisome
YLoc:peroxisome
 golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G243300.1 Wheat peroxisome 94.71 97.99
TraesCS1A01G231100.1 Wheat peroxisome 95.13 95.13
HORVU1Hr1G058880.12 Barley peroxisome 94.3 94.43
Zm00001d037939_P003 Maize peroxisome 81.64 81.75
EES18080 Sorghum peroxisome 80.81 80.92
Os05t0362100-01 Rice cytosol, mitochondrion, peroxisome 51.46 79.57
GSMUA_Achr2P01720_001 Banana peroxisome 68.29 68.19
TraesCS3D01G086900.3 Wheat peroxisome 68.57 68.09
VIT_05s0077g02140.t01 Wine grape peroxisome 67.87 67.4
PGSC0003DMT400011792 Potato peroxisome 66.62 65.89
KRH50818 Soybean nucleus 66.34 65.88
KRH02269 Soybean peroxisome 66.2 65.84
Solyc12g099440.1.1 Tomato nucleus 66.06 65.34
KRH02268 Soybean nucleus 64.95 64.68
CDY34924 Canola peroxisome 64.67 63.96
Bra040296.1-P Field mustard peroxisome 64.39 63.86
CDY05296 Canola peroxisome 64.26 63.72
AT3G06860.1 Thale cress peroxisome 64.12 63.59
Bra029608.1-P Field mustard peroxisome 63.98 63.45
CDY24662 Canola peroxisome 63.98 63.36
Bra001221.1-P Field mustard peroxisome 63.42 62.9
CDY08028 Canola peroxisome 63.42 62.81
CDX74076 Canola peroxisome 63.42 62.81
TraesCS1D01G105200.2 Wheat peroxisome 62.03 61.43
KRH25463 Soybean extracellular 7.23 61.18
PGSC0003DMT400029427 Potato endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 23.78 60.64
GSMUA_Achr3P24070_001 Banana cytosol, peroxisome, plastid 60.08 60.34
KRH50819 Soybean cytosol, extracellular, peroxisome 5.98 59.72
Solyc01g066620.2.1 Tomato plastid 58.97 59.47
KRG94502 Soybean peroxisome 17.52 54.31
TraesCS3D01G077200.1 Wheat peroxisome 54.94 54.11
TraesCS6D01G116200.1 Wheat golgi, peroxisome 54.52 53.99
PGSC0003DMT400046197 Potato cytosol 20.58 51.57
Solyc06g009160.2.1 Tomato cytosol 52.29 51.37
TraesCS3D01G321200.1 Wheat peroxisome 11.4 26.97
TraesCS3D01G430300.1 Wheat peroxisome 9.87 24.48
TraesCS3D01G430400.2 Wheat peroxisome 9.87 24.48
TraesCS4D01G183100.1 Wheat peroxisome 9.04 24.25
TraesCS6D01G224800.1 Wheat mitochondrion 7.93 23.27
TraesCS6D01G224900.1 Wheat mitochondrion 9.6 22.33
TraesCS3D01G241000.1 Wheat mitochondrion 9.32 20.18
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35KEGG:00310+4.2.1.17+1.1.1.35
KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17KEGG:00623+1.1.1.35
KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35
Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720Gene3D:3.90.226.10InterPro:3HC_DH_CMapMan:5.7.3.2.2
InterPro:6-PGluconate_DH-like_C_sfInterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoGO:GO:0003674GO:GO:0003824
GO:GO:0003857GO:GO:0006629GO:GO:0006631GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016491GO:GO:0055114InterPro:NAD(P)-bd_dom_sfPFAM:PF00378PFAM:PF00725PFAM:PF02737
ScanProsite:PS00166PANTHER:PTHR23309PANTHER:PTHR23309:SF23SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52096
EnsemblPlantsGene:TraesCS1D01G231000EnsemblPlants:TraesCS1D01G231000.1TIGR:cd06558:::
Description
No Description!
Coordinates
chr1D:+:319512244..319520392
Molecular Weight (calculated)
78915.2 Da
IEP (calculated)
9.098
GRAVY (calculated)
-0.008
Length
719 amino acids
Sequence
(BLAST)
001: MARGATTMEV RDDGVAVITI SNPPVNALSF DVIASLQRNY EEALRRNDVK AIVLTGAKGR FSGGFDINGF GNKPKNEKPG SFSIDFLTGV VEDAQKPSVA
101: AIDGVALGGG LELAMVCHAR VSTPSAQLGL PELQLGIIPG MGGTQRLPRL VGLKKALEMM LMSKSIKGVE AHKFGLVDAI VSADKLISTA CSCALEIHEH
201: KRPWLKSLLR TDRLTDIVEA KKILKFARVQ ALKQAANLQH PLVCIDVIEE GILFGPRAAL MKEVLSGKML EQSQTSKSLR HFFFAQRATS KIPNITNLGL
301: TPRRILKAAI VGGGLMGSGI ATAFILSDIV VVLKEVNEKF LNTGINRIKA NLQSFVKKGR MTQEDYEKKL SLLSGVLDYE QFRDADVVIE AVIEDLLLKQ
401: KIFSDLERSC HSNCIFATNT STIDLRLIGQ QTACQDRIVG AHFFSPAHVM PLLEIVRTQQ TSSQVIVDLL DVAKKIRKTP IVVGSCTGFA VNRMFFPYGQ
501: AAGLLVDYGL DIYHIDHVIA NFGMPTGPFR LADLVGFGVA VATGKQYYKS YPERCYKSRL TEIMLEENRT GESSHRGFYL YNDKRQASPD PDIKKYVEKS
601: RNMAGVAQDP KLMKLTDKDI VEMVFFPVVN EACRVLDEGI ALKASDLDVA SIMGMGFPSF RGGVMFWADS LGAEYVYRRL DAWSKDYGEF FRPCEYLAAR
701: ASRGTSLAAT TADGTKSRL
Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)
001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL
Arabidopsis Description
MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.