Factsheet for TraesCS3D01G430300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G472000.1	Wheat	peroxisome	99.31	99.31
TraesCS3A01G438000.1	Wheat	peroxisome	98.97	98.97
TraesCS3D01G430400.2	Wheat	peroxisome	95.52	95.52
Os01t0925200-01	Rice	nucleus, plasma membrane	86.21	85.91
KXG34022	Sorghum	peroxisome	85.86	84.69
Zm00001d011971_P001	Maize	mitochondrion, peroxisome	83.45	84.03
GSMUA_Achr7P22470_001	Banana	peroxisome	62.41	62.63
CDY43605	Canola	peroxisome	56.55	59.42
Bra027479.1-P	Field mustard	peroxisome	56.21	59.06
CDY32958	Canola	peroxisome	55.52	58.33
AT5G43280.1	Thale cress	peroxisome	55.17	57.55
KRH66641	Soybean	peroxisome	51.38	54.58
VIT_01s0146g00270.t01	Wine grape	peroxisome	51.38	54.18
Solyc05g024240.2.1	Tomato	nucleus	39.66	49.57
TraesCS6D01G224900.1	Wheat	mitochondrion	29.66	27.83
TraesCS6D01G224800.1	Wheat	mitochondrion	22.07	26.12
TraesCS4D01G183100.1	Wheat	peroxisome	20.34	22.01
TraesCS3D01G241000.1	Wheat	mitochondrion	22.76	19.88
TraesCS1D01G231000.1	Wheat	golgi, peroxisome, unclear	24.48	9.87
TraesCS1D01G105200.2	Wheat	peroxisome	21.38	8.54
TraesCS6D01G116200.1	Wheat	golgi, peroxisome	21.38	8.54
TraesCS3D01G077200.1	Wheat	peroxisome	20.69	8.22
TraesCS3D01G086900.3	Wheat	peroxisome	20.34	8.15
TraesCS3D01G321200.1	Wheat	peroxisome	3.79	3.62

Protein Annotations

EnsemblPlants:TraesCS3D01G430300.1	EnsemblPlantsGene:TraesCS3D01G430300	Gene3D:1.10.12.10	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C	InterPro:IPR014748
PANTHER:PTHR43149	PANTHER:PTHR43149:SF1	PFAM:PF00378	SEG:seg	SUPFAM:SSF52096	TIGR:cd06558
MapMan:5.7.3.5.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:544444799..544446682

Molecular Weight (calculated)

30343.9 Da

IEP (calculated)

9.014

GRAVY (calculated)

0.126

Length

290 amino acids

Sequence
(BLAST)

001: MASGGSSDAE AELRRGFKAL AVTRPDPAAA VYEVRLSRPA QRNALSPDSF AEIPRAMALL DRVPAARAVV LSAAGPHFCA GIELGGPGNP LTAPFGRGAD
101: PAAAAEGLRR AILGMQAALT AVELCRKPVI AAVHGACVGG GVDLVAACDI RYCSKDATFV LKEVDMAIVA DLGALQRLPR IVGYGNAADL ALTGRRITAA
201: EAKEMGLVSR VFDSKQELDA GVAKIAKEIS EKSANAVMGT KAVLLRSRDI TVEQGLEHVA TWNSGMLRSN DLVEAIKAFM EKRKPVFSKL

Best Arabidopsis Sequence Match ( AT5G43280.1 )
(BLAST)

001: MTMESYKTLE IIRKNTDSSV FHLIINRPSH LNALSLDFFI EFPKALSSLD QNPDVSVIIL SGAGKHFCSG IDLNSLSSIS TQSSSGNDRG RSSEQLRRKI
101: KSMQAAITAI EQCRKPVIAA IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL TARRFSGSEA KDLGLVSKVF
201: GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL

Arabidopsis Description

DCI1Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHR8]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.