Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027479.1-P | Field mustard | peroxisome | 87.77 | 88.41 |
| CDY32958 | Canola | peroxisome | 87.77 | 88.41 |
| CDY43605 | Canola | peroxisome | 87.41 | 88.04 |
| VIT_01s0146g00270.t01 | Wine grape | peroxisome | 74.1 | 74.91 |
| Solyc05g024240.2.1 | Tomato | nucleus | 55.76 | 66.81 |
| KRH66641 | Soybean | peroxisome | 64.75 | 65.93 |
| TraesCS3D01G430400.2 | Wheat | peroxisome | 57.55 | 55.17 |
| TraesCS3D01G430300.1 | Wheat | peroxisome | 57.55 | 55.17 |
| TraesCS3B01G472000.1 | Wheat | peroxisome | 57.55 | 55.17 |
| TraesCS3A01G438000.1 | Wheat | peroxisome | 57.55 | 55.17 |
| Os01t0925200-01 | Rice | nucleus, plasma membrane | 57.55 | 54.98 |
| TraesCS3A01G438100.1 | Wheat | peroxisome | 57.19 | 54.83 |
| Zm00001d011971_P001 | Maize | mitochondrion, peroxisome | 55.04 | 53.12 |
| GSMUA_Achr7P22470_001 | Banana | peroxisome | 55.04 | 52.94 |
| KXG34022 | Sorghum | peroxisome | 55.4 | 52.38 |
| AT4G16800.1 | Thale cress | mitochondrion | 27.7 | 25.58 |
| AT4G16210.1 | Thale cress | peroxisome | 23.02 | 24.15 |
| AT1G60550.1 | Thale cress | cytosol | 24.1 | 19.88 |
| AT3G06860.1 | Thale cress | peroxisome | 23.02 | 8.83 |
| AT4G29010.1 | Thale cress | peroxisome | 21.94 | 8.46 |
| AT3G15290.1 | Thale cress | cytosol, mitochondrion, peroxisome | 3.6 | 3.4 |
Protein Annotations
| Gene3D:1.10.12.10 | Gene3D:3.90.226.10 | MapMan:5.7.3.5.2 | EntrezGene:834346 | ProteinID:AED94936.1 | ProteinID:AED94937.1 |
| EMBL:AK316991 | ArrayExpress:AT5G43280 | EnsemblPlantsGene:AT5G43280 | RefSeq:AT5G43280 | TAIR:AT5G43280 | RefSeq:AT5G43280-TAIR-G |
| EnsemblPlants:AT5G43280.1 | TAIR:AT5G43280.1 | Symbol:ATDCI1 | EMBL:AY072351 | Unigene:At.43208 | ProteinID:BAB10591.1 |
| EMBL:BT002198 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:Enoyl-CoA_hyd/isom_CS | InterPro:Enoyl-CoA_hydra/iso | InterPro:Enoyl-CoA_hydra_C | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| GO:GO:0006629 | GO:GO:0006631 | GO:GO:0006635 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009062 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0051750 | InterPro:IPR014748 | RefSeq:NP_001078698.1 |
| RefSeq:NP_199142.1 | PFAM:PF00378 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00166 | PANTHER:PTHR43149 | PANTHER:PTHR43149:SF1 | UniProt:Q9FHR8 |
| SUPFAM:SSF52096 | UniParc:UPI00000AC17D | SEG:seg | : | : | : |
Description
DCI1Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHR8]
Coordinates
chr5:+:17367827..17369510
Molecular Weight (calculated)
29922.1 Da
IEP (calculated)
7.877
GRAVY (calculated)
0.035
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMESYKTLE IIRKNTDSSV FHLIINRPSH LNALSLDFFI EFPKALSSLD QNPDVSVIIL SGAGKHFCSG IDLNSLSSIS TQSSSGNDRG RSSEQLRRKI
101: KSMQAAITAI EQCRKPVIAA IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL TARRFSGSEA KDLGLVSKVF
201: GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL
101: KSMQAAITAI EQCRKPVIAA IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL TARRFSGSEA KDLGLVSKVF
201: GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.