CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011971_P001	Maize	mitochondrion, peroxisome	91.5	93.4
TraesCS3A01G438000.1	Wheat	peroxisome	85.37	86.55
TraesCS3B01G472000.1	Wheat	peroxisome	85.03	86.21
Os01t0925200-01	Rice	nucleus, plasma membrane	85.03	85.91
TraesCS3D01G430300.1	Wheat	peroxisome	84.69	85.86
TraesCS3A01G438100.1	Wheat	peroxisome	83.67	84.83
TraesCS3D01G430400.2	Wheat	peroxisome	82.99	84.14
GSMUA_Achr7P22470_001	Banana	peroxisome	63.61	64.71
Bra027479.1-P	Field mustard	peroxisome	53.4	56.88
CDY43605	Canola	peroxisome	53.06	56.52
CDY32958	Canola	peroxisome	52.72	56.16
AT5G43280.1	Thale cress	peroxisome	52.38	55.4
KRH66641	Soybean	peroxisome	51.02	54.95
VIT_01s0146g00270.t01	Wine grape	peroxisome	50.0	53.45
Solyc05g024240.2.1	Tomato	nucleus	37.41	47.41
OQU85735	Sorghum	mitochondrion	28.57	27.81
OQU85737	Sorghum	mitochondrion	27.89	26.89
EER94969	Sorghum	peroxisome, plastid	21.43	23.51
EES06293	Sorghum	plastid	24.15	21.01
EES18080	Sorghum	peroxisome	24.49	10.03
EES04919	Sorghum	peroxisome	22.45	9.08
KXG32465	Sorghum	peroxisome	21.77	8.85
EES01597	Sorghum	peroxisome, plasma membrane	2.72	2.68

Protein Annotations

Gene3D:1.10.12.10	Gene3D:3.90.226.10	MapMan:5.7.3.5.2	UniProt:A0A1B6Q7X2	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso
InterPro:Enoyl-CoA_hydra_C	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0051750	InterPro:IPR014748
EnsemblPlants:KXG34022	ProteinID:KXG34022	ProteinID:KXG34022.1	PFAM:PF00378	PANTHER:PTHR43149	PANTHER:PTHR43149:SF1
EnsemblPlantsGene:SORBI_3003G409400	SUPFAM:SSF52096	UniParc:UPI00081AEA57	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:71703211..71705315

Molecular Weight (calculated)

30744.3 Da

IEP (calculated)

8.376

GRAVY (calculated)

0.114

Length

294 amino acids

Sequence
(BLAST)

001: MAGGNRDASD AAAAEAELRA GFETLAVTRP DPSAGVYEVR LNRPAQRNAL SPAAFAEIPR AMSLLDRTPT ARAVVLSAAG PHFCAGIELG GPGNPLAAAS
101: ASADPVAAAE ALRRAVLDMQ AALTAIERCR KPVVAAVHGA CVGGGVDVVA ACDIRCCSRD ATFVLKEVDM AIVADLGALQ RLPRIVGYGN AADLALTGRK
201: ITAMEAKEMG LVTRVFDSKK ELDAGVANIA KEIAEKSAWA VMGTKAVLLR SRDVTVEQGL EHVATWNAGM MRSNDLKEAI KAFLEKRKPV FSKL

Best Arabidopsis Sequence Match ( AT5G43280.1 )
(BLAST)

001: MTMESYKTLE IIRKNTDSSV FHLIINRPSH LNALSLDFFI EFPKALSSLD QNPDVSVIIL SGAGKHFCSG IDLNSLSSIS TQSSSGNDRG RSSEQLRRKI
101: KSMQAAITAI EQCRKPVIAA IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL TARRFSGSEA KDLGLVSKVF
201: GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL

Arabidopsis Description

DCI1Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHR8]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.