CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

cytosol 1
plastid 2
peroxisome 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028909_P001	Maize	extracellular, mitochondrion	95.52	95.17
Os03t0310400-01	Rice	extracellular, nucleus, plasma membrane	88.06	88.06
TraesCS4A01G122800.1	Wheat	peroxisome	86.57	86.57
TraesCS4D01G183100.1	Wheat	peroxisome	86.57	86.57
HORVU4Hr1G053180.1	Barley	peroxisome	86.19	86.19
TraesCS4B01G182600.1	Wheat	peroxisome	85.82	85.82
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	73.88	75.29
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	73.88	75.0
VIT_05s0077g00860.t01	Wine grape	peroxisome, plastid	72.01	72.56
KRH50717	Soybean	mitochondrion, peroxisome	29.1	67.24
KRH02364	Soybean	peroxisome	66.42	67.17
PGSC0003DMT400003039	Potato	cytosol	65.67	66.42
Solyc01g059830.2.1	Tomato	nucleus, plastid	64.18	64.91
CDY09705	Canola	cytosol, mitochondrion, peroxisome	62.69	64.86
CDX90535	Canola	peroxisome	62.69	64.86
AT4G16210.1	Thale cress	peroxisome	63.81	64.53
Bra012731.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.31	64.48
KRH50718	Soybean	plastid	37.69	60.84
OQU85735	Sorghum	mitochondrion	26.49	23.51
OQU85737	Sorghum	mitochondrion	25.0	21.97
EES06293	Sorghum	plastid	27.24	21.6
KXG34022	Sorghum	peroxisome	23.51	21.43
KXG32465	Sorghum	peroxisome	23.13	8.58
EES18080	Sorghum	peroxisome	22.76	8.5
EES04919	Sorghum	peroxisome	22.01	8.12
EES01597	Sorghum	peroxisome, plasma membrane	3.73	3.34

Protein Annotations

Gene3D:3.90.226.10	MapMan:35.1	EntrezGene:8081070	UniProt:C5WMF3	InterPro:ClpP/crotonase-like_dom_sf	EnsemblPlants:EER94969
ProteinID:EER94969	ProteinID:EER94969.1	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152
PFAM:PF00378	PANTHER:PTHR43802	EnsemblPlantsGene:SORBI_3001G393800	SUPFAM:SSF52096	unigene:Sbi.8620	UniParc:UPI0001A82EDD
RefSeq:XP_002467971.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:68009228..68011226

Molecular Weight (calculated)

28727.8 Da

IEP (calculated)

8.328

GRAVY (calculated)

0.062

Length

268 amino acids

Sequence
(BLAST)

001: MGAASPDSGD LIVVEPARPG SPVAVVTINR PAALNALTKP MMISLAAAFR RLGADDSVAA VVLAGRGRAF CSGVDLTAAE EVFKGDVKDV ATDPVAQMEL
101: CRKPIVGAIA GFAVTAGFEI ALACDVLVAG RSAKFLDTHA KFGIFPSWSL SQKLSRIIGP NRAREVSLTC MPVTAEMAER WGLVNHVVDD NEVLSKAIEV
201: AEAIARNNRN LVVLYKSVIN DGFKLDLEHA QALEKERGHN YYNGMTKEQF TNMQKFIQGR SSKTPSKL

Best Arabidopsis Sequence Match ( AT4G16210.1 )
(BLAST)

001: MDQTVSENLI QVKKESGGIA VITINRPKSL NSLTRAMMVD LAKAFKDMDS DESVQVVIFT GSGRSFCSGV DLTAAESVFK GDVKDPETDP VVQMERLRKP
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL

Arabidopsis Description

ECHIAProbable enoyl-CoA hydratase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q6NL24]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.