Factsheet for HORVU4Hr1G053180.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G183100.1	Wheat	peroxisome	97.76	97.76
TraesCS4B01G182600.1	Wheat	peroxisome	97.01	97.01
TraesCS4A01G122800.1	Wheat	peroxisome	97.01	97.01
Os03t0310400-01	Rice	extracellular, nucleus, plasma membrane	89.18	89.18
EER94969	Sorghum	peroxisome, plastid	86.19	86.19
Zm00001d028909_P001	Maize	extracellular, mitochondrion	83.96	83.64
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	70.52	71.86
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	69.78	70.83
VIT_05s0077g00860.t01	Wine grape	peroxisome, plastid	69.78	70.3
KRH50717	Soybean	mitochondrion, peroxisome	28.36	65.52
KRH02364	Soybean	peroxisome	64.55	65.28
AT4G16210.1	Thale cress	peroxisome	63.43	64.15
CDX90535	Canola	peroxisome	61.94	64.09
CDY09705	Canola	cytosol, mitochondrion, peroxisome	61.94	64.09
PGSC0003DMT400003039	Potato	cytosol	63.06	63.77
Bra012731.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.57	63.71
Solyc01g059830.2.1	Tomato	nucleus, plastid	62.31	63.02
KRH50718	Soybean	plastid	37.69	60.84
HORVU6Hr1G062260.3	Barley	plastid	26.49	24.48
HORVU6Hr1G062320.2	Barley	mitochondrion	25.37	22.52
HORVU1Hr1G027810.27	Barley	peroxisome	16.42	20.18
HORVU3Hr1G059840.4	Barley	plastid	26.12	19.44
HORVU5Hr1G076170.6	Barley	plastid	12.69	11.45
HORVU6Hr1G021980.6	Barley	cytosol	11.94	11.39
HORVU1Hr1G058880.12	Barley	peroxisome	24.63	9.19
HORVU1Hr1G022450.40	Barley	peroxisome	22.76	9.05
HORVU6Hr1G024100.1	Barley	peroxisome	23.13	8.54
HORVU3Hr1G013880.1	Barley	peroxisome	23.13	8.52
HORVU3Hr1G015590.13	Barley	peroxisome	22.76	8.37
HORVU2Hr1G070450.22	Barley	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	5.22	3.33
HORVU2Hr1G047980.1	Barley	peroxisome	1.49	2.78
HORVU7Hr1G111680.1	Barley	cytosol, mitochondrion, peroxisome	0.75	1.72
HORVU4Hr1G045170.1	Barley	extracellular, mitochondrion, peroxisome	0.75	1.72
HORVU3Hr1G083490.1	Barley	cytosol, mitochondrion, peroxisome	0.75	1.37

Protein Annotations

EnsemblPlants:HORVU4Hr1G053180.1	EnsemblPlantsGene:HORVU4Hr1G053180	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152
InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR43802	PFAM:PF00378	SEG:seg	SUPFAM:SSF52096
UniParc:UPI000295B58C	UniProt:M0YT83	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:442886504..442889577

Molecular Weight (calculated)

28742.8 Da

IEP (calculated)

8.632

GRAVY (calculated)

0.049

Length

268 amino acids

Sequence
(BLAST)

001: MDATSPVSGD LILVEPARPG SKVAVVTINR PDALNALTRS MMISLASAFR QLDADDGVAA VVLAGRGRSF CAGVDLTAAE EVFKGDVNDP AANPVAQMEL
101: CRKPIVGAVA GFAVTAGFEI ALACDLLVAG RSAKFLDTHA KFGIFPSWGL SQKLSRLIGP NRAREVSLTC MPVTAEMAEK WGLANHIVED SQVLSKAIEV
201: AEAIARNNRN LVVLYKSVIN DGLQLDMKHA RALEKERAVN YYNGMTKEQF ANMQKFIQGR SSKPPSKL

Best Arabidopsis Sequence Match ( AT4G16210.1 )
(BLAST)

001: MDQTVSENLI QVKKESGGIA VITINRPKSL NSLTRAMMVD LAKAFKDMDS DESVQVVIFT GSGRSFCSGV DLTAAESVFK GDVKDPETDP VVQMERLRKP
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL

Arabidopsis Description

ECHIAProbable enoyl-CoA hydratase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q6NL24]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.