Factsheet for TraesCS4A01G122800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G183100.1	Wheat	peroxisome	99.25	99.25
TraesCS4B01G182600.1	Wheat	peroxisome	97.76	97.76
HORVU4Hr1G053180.1	Barley	peroxisome	97.01	97.01
Os03t0310400-01	Rice	extracellular, nucleus, plasma membrane	89.18	89.18
EER94969	Sorghum	peroxisome, plastid	86.57	86.57
Zm00001d028909_P001	Maize	extracellular, mitochondrion	84.33	84.01
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	70.52	71.86
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	69.4	70.45
VIT_05s0077g00860.t01	Wine grape	peroxisome, plastid	67.91	68.42
KRH02364	Soybean	peroxisome	63.43	64.15
KRH50717	Soybean	mitochondrion, peroxisome	27.61	63.79
PGSC0003DMT400003039	Potato	cytosol	62.31	63.02
Solyc01g059830.2.1	Tomato	nucleus, plastid	61.57	62.26
AT4G16210.1	Thale cress	peroxisome	61.57	62.26
CDY09705	Canola	cytosol, mitochondrion, peroxisome	60.07	62.16
CDX90535	Canola	peroxisome	60.07	62.16
Bra012731.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.7	61.78
KRH50718	Soybean	plastid	36.94	59.64
TraesCS3A01G240600.1	Wheat	mitochondrion	26.12	21.08
TraesCS3A01G438100.1	Wheat	peroxisome	22.76	21.03
TraesCS3A01G438000.1	Wheat	peroxisome	22.01	20.34
TraesCS1A01G231100.1	Wheat	peroxisome	24.25	9.04
TraesCS1A01G096200.2	Wheat	peroxisome	23.51	8.63
TraesCS6A01G125800.1	Wheat	golgi	23.13	8.54
TraesCS3A01G077000.3	Wheat	peroxisome	23.13	8.33
TraesCS3A01G086700.2	Wheat	peroxisome	22.01	8.15
TraesCS3A01G327700.1	Wheat	peroxisome	2.99	2.63

Protein Annotations

EnsemblPlants:TraesCS4A01G122800.1	EnsemblPlantsGene:TraesCS4A01G122800	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152
InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR43802	PFAM:PF00378	SEG:seg	SUPFAM:SSF52096
TIGR:cd06558	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:152738727..152741137

Molecular Weight (calculated)

28617.6 Da

IEP (calculated)

8.634

GRAVY (calculated)

0.062

Length

268 amino acids

Sequence
(BLAST)

001: MGATSPDSGD LILVEPASPG SKVAVVTINR PDALNALTRS MMISLASAFR RLDADDGVAA VVLAGRGRSF CAGVDLTAAE EVFKGDVNDP AANPVAQMEL
101: CRKPIVGAVA GFAVTAGFEI ALACDLLVAG RSAKFLDTHA KFGIFPSWGL SQKLSRLIGP NRAREVSLAC MPVTAEMAEK WGLANHIVDD SQVLSKAIEV
201: AEAIARNNRN LVVLYKSVIN DGLQLDMKHA RALEKERAVN YYNGMTKEQF ANMQKFIQGR SSRAPSKL

Best Arabidopsis Sequence Match ( AT4G16210.1 )
(BLAST)

001: MDQTVSENLI QVKKESGGIA VITINRPKSL NSLTRAMMVD LAKAFKDMDS DESVQVVIFT GSGRSFCSGV DLTAAESVFK GDVKDPETDP VVQMERLRKP
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL

Arabidopsis Description

ECHIAProbable enoyl-CoA hydratase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q6NL24]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.