Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 1
  • mitochondrion 2
  • peroxisome 2
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, peroxisome
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
 golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G153900.1 Wheat peroxisome 96.69 96.69
TraesCS6D01G116200.1 Wheat golgi, peroxisome 95.73 95.73
HORVU6Hr1G024100.1 Barley peroxisome 94.35 94.35
TraesCS3A01G077000.3 Wheat peroxisome 91.87 89.65
Os02t0274100-01 Rice plasma membrane 87.88 87.88
EES04919 Sorghum peroxisome 87.88 87.76
Zm00001d053308_P009 Maize peroxisome 87.05 82.18
GSMUA_Achr7P14420_001 Banana peroxisome 74.79 74.9
GSMUA_Achr8P19760_001 Banana peroxisome 69.7 69.22
CDY35240 Canola peroxisome 68.59 68.98
Bra011076.1-P Field mustard peroxisome 68.46 68.84
CDY06852 Canola peroxisome 68.32 68.7
CDX97462 Canola peroxisome 68.04 68.52
CDY66477 Canola peroxisome 68.04 68.52
VIT_11s0016g03690.t01 Wine grape peroxisome 67.91 68.09
Solyc07g019670.2.1 Tomato plastid 67.77 68.05
KRH48371 Soybean nucleus 67.63 67.82
Solyc12g007170.1.1 Tomato plastid 67.49 67.68
AT4G29010.1 Thale cress peroxisome 67.08 67.55
Bra010347.1-P Field mustard peroxisome 68.04 67.3
PGSC0003DMT400001017 Potato cytosol 66.94 67.13
CDY69211 Canola mitochondrion, peroxisome 56.34 67.05
KRH39301 Soybean endoplasmic reticulum, mitochondrion, nucleus 66.39 66.57
Bra024170.1-P Field mustard peroxisome 64.46 63.5
Solyc08g068390.2.1 Tomato peroxisome 59.37 60.7
PGSC0003DMT400009982 Potato peroxisome 59.5 60.67
PGSC0003DMT400014020 Potato peroxisome 59.92 60.33
CDX92908 Canola peroxisome 64.88 59.85
TraesCS3A01G086700.2 Wheat peroxisome 57.58 57.73
TraesCS1A01G231100.1 Wheat peroxisome 54.13 54.66
TraesCS1A01G096200.2 Wheat peroxisome 53.72 53.42
Zm00001d015992_P001 Maize peroxisome 87.47 52.83
TraesCS3A01G327700.1 Wheat peroxisome 12.53 29.93
TraesCS4A01G122800.1 Wheat peroxisome 8.54 23.13
TraesCS3A01G438100.1 Wheat peroxisome 8.82 22.07
TraesCS3A01G438000.1 Wheat peroxisome 8.4 21.03
TraesCS3A01G240600.1 Wheat mitochondrion 9.23 20.18
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720Gene3D:3.90.226.10
InterPro:3HC_DH_CMapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfInterPro:AIM1InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hyd/isom_CS
InterPro:Enoyl-CoA_hydra/isoGO:GO:0003674GO:GO:0003824GO:GO:0003857GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0006629GO:GO:0006631GO:GO:0006635
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491GO:GO:0055114
InterPro:NAD(P)-bd_dom_sfPFAM:PF00378PFAM:PF00725PFAM:PF02737ScanProsite:PS00166PANTHER:PTHR23309
PANTHER:PTHR23309:SF10SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52096EnsemblPlantsGene:TraesCS6A01G125800EnsemblPlants:TraesCS6A01G125800.1
TIGR:cd06558SEG:seg::::
Description
No Description!
Coordinates
chr6A:+:99195122..99204604
Molecular Weight (calculated)
78770.9 Da
IEP (calculated)
9.603
GRAVY (calculated)
0.096
Length
726 amino acids
Sequence
(BLAST)
001: MAGAIRVTME VGADGVALIT ICNPPVNALH PIIIQGLKEK YAEAAGRDDV KAIVLTGAAG KFCGGFDINV FTKVHETGDV SLMPDVSVDL VSNMMEDGKK
101: PSVAAIQGLA LGGGLELIMG CHARISTPEA QLGLPELTLG VIPGFGGTQR LPRLVGLPKA IEMMLQSKFI TAKEGKERGL IDALCSPDEL IKMSRFWALE
201: IANYRKPWIR SLGRTDRLGS LSEARAILSM ARQQAKKVAA NMPQHQACLD VVEEGVLYGG QAGVVKEAKV FKELVLSTTS RALVHVFFAQ RSTTKVPGVT
301: DIQLKPRKIR KVAVIGGGLM GSGIATALLV SNISVVLKEV NPQFLQRGQK TIAGNLEGLV KRGSLTKDKM SKAISLLKGA LDYSDFKDVD MVIEAVIEKI
401: PLKQSIFADI EKICPPHCIL ATNTSTIDLN IVGEKTNSQD RIIGAHFFSP AHIMPLLEIV RTERTSPQAV LDLITVGKII KKVPVVVGNC TGFAVNRTFF
501: PYGQAAHLLV SLGIDLFRID RVISNFGMPM GPFQLQDVAG YGVALAVKDI YAAAFGTRNF HSGLVELMAK NGRQGKINGK GYYLYEKGAK PKPDPSVQHV
601: IDEYRRQTKK MPGGKPVTLS DQDILEMVFF PVVNEACRVM DENVVIRAAD LDIASVLGMG FPKYRGGLIF WADTVGASYI HSKLSKWAEI YGDFFKPSSY
701: LEERAKSGRP LSCFVEAVRW HTKLLA
Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)
001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L
Arabidopsis Description
AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.